Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4rl1Q8K0S5 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4rl1Q8K0S5 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.21■□□□□ 0.03
Rtn4rl1Q8K0S5 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4rl1Q8K0S5 Gm24543-201ENSMUST00000103867 82 ntBASIC15.21■□□□□ 0.03
Rtn4rl1Q8K0S5 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4rl1Q8K0S5 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4rl1Q8K0S5 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC15.21■□□□□ 0.03
Rtn4rl1Q8K0S5 Gm15321-201ENSMUST00000121290 288 ntBASIC15.21■□□□□ 0.03
Rtn4rl1Q8K0S5 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Rtn4rl1Q8K0S5 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.21■□□□□ 0.03
Rtn4rl1Q8K0S5 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC15.21■□□□□ 0.03
Rtn4rl1Q8K0S5 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Rtn4rl1Q8K0S5 Gm9719-201ENSMUST00000162765 543 ntBASIC15.21■□□□□ 0.03
Rtn4rl1Q8K0S5 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4rl1Q8K0S5 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Rtn4rl1Q8K0S5 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4rl1Q8K0S5 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4rl1Q8K0S5 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn4rl1Q8K0S5 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
Rtn4rl1Q8K0S5 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rtn4rl1Q8K0S5 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.21■□□□□ 0.02
Rtn4rl1Q8K0S5 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Rtn4rl1Q8K0S5 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rtn4rl1Q8K0S5 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4rl1Q8K0S5 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.2■□□□□ 0.02
Rtn4rl1Q8K0S5 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4rl1Q8K0S5 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4rl1Q8K0S5 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.2■□□□□ 0.02
Rtn4rl1Q8K0S5 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4rl1Q8K0S5 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.2■□□□□ 0.02
Rtn4rl1Q8K0S5 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.2■□□□□ 0.02
Rtn4rl1Q8K0S5 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC15.2■□□□□ 0.02
Rtn4rl1Q8K0S5 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4rl1Q8K0S5 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rtn4rl1Q8K0S5 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4rl1Q8K0S5 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4rl1Q8K0S5 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4rl1Q8K0S5 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4rl1Q8K0S5 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.2■□□□□ 0.02
Rtn4rl1Q8K0S5 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4rl1Q8K0S5 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4rl1Q8K0S5 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4rl1Q8K0S5 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Rtn4rl1Q8K0S5 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4rl1Q8K0S5 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4rl1Q8K0S5 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4rl1Q8K0S5 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn4rl1Q8K0S5 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn4rl1Q8K0S5 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn4rl1Q8K0S5 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn4rl1Q8K0S5 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn4rl1Q8K0S5 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Rtn4rl1Q8K0S5 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn4rl1Q8K0S5 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.19■□□□□ 0.02
Rtn4rl1Q8K0S5 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn4rl1Q8K0S5 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rtn4rl1Q8K0S5 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Rtn4rl1Q8K0S5 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn4rl1Q8K0S5 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.19■□□□□ 0.02
Rtn4rl1Q8K0S5 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Rtn4rl1Q8K0S5 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Rtn4rl1Q8K0S5 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.19■□□□□ 0.02
Rtn4rl1Q8K0S5 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn4rl1Q8K0S5 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC15.19■□□□□ 0.02
Rtn4rl1Q8K0S5 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn4rl1Q8K0S5 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn4rl1Q8K0S5 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.19■□□□□ 0.02
Rtn4rl1Q8K0S5 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn4rl1Q8K0S5 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn4rl1Q8K0S5 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn4rl1Q8K0S5 Gm3365-201ENSMUST00000216296 1480 ntBASIC15.19■□□□□ 0.02
Rtn4rl1Q8K0S5 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rtn4rl1Q8K0S5 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn4rl1Q8K0S5 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn4rl1Q8K0S5 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn4rl1Q8K0S5 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn4rl1Q8K0S5 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn4rl1Q8K0S5 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn4rl1Q8K0S5 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn4rl1Q8K0S5 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn4rl1Q8K0S5 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rtn4rl1Q8K0S5 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rtn4rl1Q8K0S5 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn4rl1Q8K0S5 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rtn4rl1Q8K0S5 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn4rl1Q8K0S5 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn4rl1Q8K0S5 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn4rl1Q8K0S5 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn4rl1Q8K0S5 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn4rl1Q8K0S5 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn4rl1Q8K0S5 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn4rl1Q8K0S5 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Rtn4rl1Q8K0S5 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rtn4rl1Q8K0S5 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC15.18■□□□□ 0.02
Rtn4rl1Q8K0S5 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC15.18■□□□□ 0.02
Rtn4rl1Q8K0S5 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC15.18■□□□□ 0.02
Rtn4rl1Q8K0S5 Gm29667-201ENSMUST00000190817 490 ntBASIC15.18■□□□□ 0.02
Rtn4rl1Q8K0S5 Gm7653-201ENSMUST00000214567 508 ntBASIC15.18■□□□□ 0.02
Rtn4rl1Q8K0S5 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms