Protein–RNA interactions for Protein: Q8JZK6

Trim61, MCG22896, isoform CRA_b, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61Q8JZK6 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.9■□□□□ 0.14
Trim61Q8JZK6 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Trim61Q8JZK6 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.9■□□□□ 0.14
Trim61Q8JZK6 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim61Q8JZK6 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.9■□□□□ 0.14
Trim61Q8JZK6 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trim61Q8JZK6 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.9■□□□□ 0.14
Trim61Q8JZK6 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.9■□□□□ 0.14
Trim61Q8JZK6 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.9■□□□□ 0.14
Trim61Q8JZK6 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim61Q8JZK6 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.9■□□□□ 0.14
Trim61Q8JZK6 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim61Q8JZK6 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Trim61Q8JZK6 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Trim61Q8JZK6 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trim61Q8JZK6 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.9■□□□□ 0.14
Trim61Q8JZK6 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Trim61Q8JZK6 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim61Q8JZK6 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trim61Q8JZK6 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim61Q8JZK6 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim61Q8JZK6 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim61Q8JZK6 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim61Q8JZK6 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim61Q8JZK6 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim61Q8JZK6 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim61Q8JZK6 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim61Q8JZK6 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim61Q8JZK6 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trim61Q8JZK6 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim61Q8JZK6 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trim61Q8JZK6 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.89■□□□□ 0.13
Trim61Q8JZK6 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.89■□□□□ 0.13
Trim61Q8JZK6 Gm18057-201ENSMUST00000208220 503 ntBASIC15.89■□□□□ 0.13
Trim61Q8JZK6 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.89■□□□□ 0.13
Trim61Q8JZK6 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim61Q8JZK6 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim61Q8JZK6 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.88■□□□□ 0.13
Trim61Q8JZK6 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trim61Q8JZK6 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trim61Q8JZK6 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim61Q8JZK6 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim61Q8JZK6 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trim61Q8JZK6 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim61Q8JZK6 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim61Q8JZK6 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.88■□□□□ 0.13
Trim61Q8JZK6 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trim61Q8JZK6 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.88■□□□□ 0.13
Trim61Q8JZK6 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Trim61Q8JZK6 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trim61Q8JZK6 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.88■□□□□ 0.13
Trim61Q8JZK6 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.88■□□□□ 0.13
Trim61Q8JZK6 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim61Q8JZK6 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim61Q8JZK6 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.88■□□□□ 0.13
Trim61Q8JZK6 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim61Q8JZK6 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.88■□□□□ 0.13
Trim61Q8JZK6 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim61Q8JZK6 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim61Q8JZK6 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim61Q8JZK6 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim61Q8JZK6 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim61Q8JZK6 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Trim61Q8JZK6 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trim61Q8JZK6 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Trim61Q8JZK6 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.87■□□□□ 0.13
Trim61Q8JZK6 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim61Q8JZK6 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim61Q8JZK6 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trim61Q8JZK6 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.87■□□□□ 0.13
Trim61Q8JZK6 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.87■□□□□ 0.13
Trim61Q8JZK6 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim61Q8JZK6 Mir449b-201ENSMUST00000104833 80 ntBASIC15.87■□□□□ 0.13
Trim61Q8JZK6 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trim61Q8JZK6 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trim61Q8JZK6 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trim61Q8JZK6 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.87■□□□□ 0.13
Trim61Q8JZK6 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trim61Q8JZK6 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim61Q8JZK6 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Trim61Q8JZK6 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim61Q8JZK6 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim61Q8JZK6 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.87■□□□□ 0.13
Trim61Q8JZK6 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trim61Q8JZK6 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trim61Q8JZK6 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim61Q8JZK6 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trim61Q8JZK6 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim61Q8JZK6 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim61Q8JZK6 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.86■□□□□ 0.13
Trim61Q8JZK6 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim61Q8JZK6 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim61Q8JZK6 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim61Q8JZK6 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trim61Q8JZK6 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim61Q8JZK6 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim61Q8JZK6 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
Trim61Q8JZK6 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.86■□□□□ 0.13
Trim61Q8JZK6 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trim61Q8JZK6 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms