Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rbm28Q8CGC6 Gm15427-201ENSMUST00000117288 531 ntBASIC17.89■□□□□ 0.45
Rbm28Q8CGC6 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.89■□□□□ 0.45
Rbm28Q8CGC6 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rbm28Q8CGC6 Gm27301-201ENSMUST00000184012 127 ntBASIC17.89■□□□□ 0.45
Rbm28Q8CGC6 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.89■□□□□ 0.45
Rbm28Q8CGC6 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Rbm28Q8CGC6 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rbm28Q8CGC6 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Rbm28Q8CGC6 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rbm28Q8CGC6 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.88■□□□□ 0.45
Rbm28Q8CGC6 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rbm28Q8CGC6 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.88■□□□□ 0.45
Rbm28Q8CGC6 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rbm28Q8CGC6 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.88■□□□□ 0.45
Rbm28Q8CGC6 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.88■□□□□ 0.45
Rbm28Q8CGC6 Gm27494-201ENSMUST00000184735 189 ntBASIC17.88■□□□□ 0.45
Rbm28Q8CGC6 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.88■□□□□ 0.45
Rbm28Q8CGC6 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.88■□□□□ 0.45
Rbm28Q8CGC6 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rbm28Q8CGC6 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rbm28Q8CGC6 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rbm28Q8CGC6 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.88■□□□□ 0.45
Rbm28Q8CGC6 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rbm28Q8CGC6 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rbm28Q8CGC6 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rbm28Q8CGC6 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
Rbm28Q8CGC6 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rbm28Q8CGC6 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Rbm28Q8CGC6 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rbm28Q8CGC6 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rbm28Q8CGC6 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rbm28Q8CGC6 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rbm28Q8CGC6 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rbm28Q8CGC6 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rbm28Q8CGC6 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rbm28Q8CGC6 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.88■□□□□ 0.45
Rbm28Q8CGC6 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Rbm28Q8CGC6 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rbm28Q8CGC6 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rbm28Q8CGC6 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rbm28Q8CGC6 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rbm28Q8CGC6 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rbm28Q8CGC6 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rbm28Q8CGC6 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rbm28Q8CGC6 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rbm28Q8CGC6 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.87■□□□□ 0.45
Rbm28Q8CGC6 Mir1895-201ENSMUST00000122615 79 ntBASIC17.87■□□□□ 0.45
Rbm28Q8CGC6 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.87■□□□□ 0.45
Rbm28Q8CGC6 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rbm28Q8CGC6 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Rbm28Q8CGC6 Thap2-203ENSMUST00000218989 527 ntBASIC17.87■□□□□ 0.45
Rbm28Q8CGC6 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.87■□□□□ 0.45
Rbm28Q8CGC6 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rbm28Q8CGC6 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rbm28Q8CGC6 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Rbm28Q8CGC6 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rbm28Q8CGC6 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rbm28Q8CGC6 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rbm28Q8CGC6 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rbm28Q8CGC6 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rbm28Q8CGC6 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rbm28Q8CGC6 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rbm28Q8CGC6 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rbm28Q8CGC6 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rbm28Q8CGC6 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rbm28Q8CGC6 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rbm28Q8CGC6 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rbm28Q8CGC6 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rbm28Q8CGC6 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Rbm28Q8CGC6 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Rbm28Q8CGC6 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rbm28Q8CGC6 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Rbm28Q8CGC6 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rbm28Q8CGC6 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rbm28Q8CGC6 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.86■□□□□ 0.45
Rbm28Q8CGC6 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Rbm28Q8CGC6 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rbm28Q8CGC6 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.86■□□□□ 0.45
Rbm28Q8CGC6 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.86■□□□□ 0.45
Rbm28Q8CGC6 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Rbm28Q8CGC6 Gm11025-201ENSMUST00000140773 466 ntBASIC17.86■□□□□ 0.45
Rbm28Q8CGC6 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Rbm28Q8CGC6 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rbm28Q8CGC6 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rbm28Q8CGC6 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Rbm28Q8CGC6 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rbm28Q8CGC6 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rbm28Q8CGC6 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rbm28Q8CGC6 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rbm28Q8CGC6 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rbm28Q8CGC6 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rbm28Q8CGC6 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rbm28Q8CGC6 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
Rbm28Q8CGC6 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rbm28Q8CGC6 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rbm28Q8CGC6 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rbm28Q8CGC6 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
Rbm28Q8CGC6 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rbm28Q8CGC6 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms