Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ShfQ8CG80 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.52□□□□□ -0.25
ShfQ8CG80 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.52□□□□□ -0.25
ShfQ8CG80 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.52□□□□□ -0.25
ShfQ8CG80 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ShfQ8CG80 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ShfQ8CG80 Grk6-207ENSMUST00000225925 2769 ntBASIC13.52□□□□□ -0.25
ShfQ8CG80 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ShfQ8CG80 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
ShfQ8CG80 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
ShfQ8CG80 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
ShfQ8CG80 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
ShfQ8CG80 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
ShfQ8CG80 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
ShfQ8CG80 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ShfQ8CG80 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ShfQ8CG80 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ShfQ8CG80 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
ShfQ8CG80 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ShfQ8CG80 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
ShfQ8CG80 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ShfQ8CG80 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ShfQ8CG80 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ShfQ8CG80 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
ShfQ8CG80 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
ShfQ8CG80 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ShfQ8CG80 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ShfQ8CG80 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
ShfQ8CG80 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.51□□□□□ -0.25
ShfQ8CG80 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ShfQ8CG80 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ShfQ8CG80 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.51□□□□□ -0.25
ShfQ8CG80 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ShfQ8CG80 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ShfQ8CG80 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
ShfQ8CG80 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ShfQ8CG80 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ShfQ8CG80 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ShfQ8CG80 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ShfQ8CG80 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ShfQ8CG80 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ShfQ8CG80 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ShfQ8CG80 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ShfQ8CG80 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
ShfQ8CG80 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ShfQ8CG80 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ShfQ8CG80 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ShfQ8CG80 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ShfQ8CG80 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ShfQ8CG80 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ShfQ8CG80 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
ShfQ8CG80 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
ShfQ8CG80 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ShfQ8CG80 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ShfQ8CG80 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ShfQ8CG80 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.5□□□□□ -0.25
ShfQ8CG80 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ShfQ8CG80 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ShfQ8CG80 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ShfQ8CG80 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
ShfQ8CG80 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
ShfQ8CG80 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ShfQ8CG80 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ShfQ8CG80 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ShfQ8CG80 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ShfQ8CG80 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ShfQ8CG80 Gm27646-201ENSMUST00000183989 110 ntBASIC13.5□□□□□ -0.25
ShfQ8CG80 Gm33142-201ENSMUST00000193913 867 ntBASIC13.5□□□□□ -0.25
ShfQ8CG80 Gm43767-201ENSMUST00000198933 381 ntBASIC13.5□□□□□ -0.25
ShfQ8CG80 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.5□□□□□ -0.25
ShfQ8CG80 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.5□□□□□ -0.25
ShfQ8CG80 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ShfQ8CG80 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.5□□□□□ -0.25
ShfQ8CG80 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.5□□□□□ -0.25
ShfQ8CG80 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ShfQ8CG80 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
ShfQ8CG80 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ShfQ8CG80 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ShfQ8CG80 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ShfQ8CG80 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.5□□□□□ -0.25
ShfQ8CG80 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
ShfQ8CG80 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ShfQ8CG80 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ShfQ8CG80 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ShfQ8CG80 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
ShfQ8CG80 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
ShfQ8CG80 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.5□□□□□ -0.25
ShfQ8CG80 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
ShfQ8CG80 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
ShfQ8CG80 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.49□□□□□ -0.25
ShfQ8CG80 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ShfQ8CG80 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
ShfQ8CG80 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
ShfQ8CG80 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ShfQ8CG80 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
ShfQ8CG80 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ShfQ8CG80 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ShfQ8CG80 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ShfQ8CG80 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ShfQ8CG80 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms