Protein–RNA interactions for Protein: Q8BVF4

Ccdc30, Coiled-coil domain-containing protein 30, mousemouse

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc30Q8BVF4 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc30Q8BVF4 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc30Q8BVF4 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc30Q8BVF4 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc30Q8BVF4 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
Ccdc30Q8BVF4 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc30Q8BVF4 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC19.54■□□□□ 0.72
Ccdc30Q8BVF4 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC19.54■□□□□ 0.72
Ccdc30Q8BVF4 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Ccdc30Q8BVF4 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC19.54■□□□□ 0.72
Ccdc30Q8BVF4 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc30Q8BVF4 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc30Q8BVF4 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc30Q8BVF4 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc30Q8BVF4 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc30Q8BVF4 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc30Q8BVF4 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC19.53■□□□□ 0.72
Ccdc30Q8BVF4 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc30Q8BVF4 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc30Q8BVF4 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc30Q8BVF4 Gm5357-201ENSMUST00000212720 1924 ntBASIC19.53■□□□□ 0.72
Ccdc30Q8BVF4 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc30Q8BVF4 Gm37728-201ENSMUST00000195025 2292 ntBASIC19.53■□□□□ 0.72
Ccdc30Q8BVF4 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc30Q8BVF4 AC025913.2-201ENSMUST00000220136 1766 ntBASIC19.53■□□□□ 0.72
Ccdc30Q8BVF4 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Ccdc30Q8BVF4 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC19.53■□□□□ 0.72
Ccdc30Q8BVF4 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc30Q8BVF4 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Ccdc30Q8BVF4 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc30Q8BVF4 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC19.53■□□□□ 0.72
Ccdc30Q8BVF4 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Ccdc30Q8BVF4 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc30Q8BVF4 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc30Q8BVF4 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc30Q8BVF4 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc30Q8BVF4 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc30Q8BVF4 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc30Q8BVF4 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc30Q8BVF4 Gm43598-201ENSMUST00000202482 2479 ntBASIC19.52■□□□□ 0.72
Ccdc30Q8BVF4 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc30Q8BVF4 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc30Q8BVF4 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc30Q8BVF4 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc30Q8BVF4 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC19.52■□□□□ 0.72
Ccdc30Q8BVF4 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC19.52■□□□□ 0.72
Ccdc30Q8BVF4 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc30Q8BVF4 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC19.52■□□□□ 0.72
Ccdc30Q8BVF4 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC19.52■□□□□ 0.72
Ccdc30Q8BVF4 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC19.52■□□□□ 0.72
Ccdc30Q8BVF4 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Ccdc30Q8BVF4 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc30Q8BVF4 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc30Q8BVF4 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc30Q8BVF4 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc30Q8BVF4 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc30Q8BVF4 Gm10313-201ENSMUST00000095320 1002 ntBASIC19.52■□□□□ 0.72
Ccdc30Q8BVF4 Camk2g-217ENSMUST00000226630 1937 ntBASIC19.52■□□□□ 0.72
Ccdc30Q8BVF4 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc30Q8BVF4 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc30Q8BVF4 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
Ccdc30Q8BVF4 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ccdc30Q8BVF4 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Ccdc30Q8BVF4 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ccdc30Q8BVF4 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC19.51■□□□□ 0.71
Ccdc30Q8BVF4 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc30Q8BVF4 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc30Q8BVF4 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc30Q8BVF4 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC19.51■□□□□ 0.71
Ccdc30Q8BVF4 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC19.51■□□□□ 0.71
Ccdc30Q8BVF4 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc30Q8BVF4 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc30Q8BVF4 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc30Q8BVF4 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC19.51■□□□□ 0.71
Ccdc30Q8BVF4 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc30Q8BVF4 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc30Q8BVF4 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Ccdc30Q8BVF4 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc30Q8BVF4 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc30Q8BVF4 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc30Q8BVF4 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc30Q8BVF4 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC19.5■□□□□ 0.71
Ccdc30Q8BVF4 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc30Q8BVF4 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC19.5■□□□□ 0.71
Ccdc30Q8BVF4 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC19.5■□□□□ 0.71
Ccdc30Q8BVF4 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc30Q8BVF4 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc30Q8BVF4 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC19.5■□□□□ 0.71
Ccdc30Q8BVF4 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc30Q8BVF4 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc30Q8BVF4 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Ccdc30Q8BVF4 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC19.5■□□□□ 0.71
Ccdc30Q8BVF4 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc30Q8BVF4 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc30Q8BVF4 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc30Q8BVF4 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC19.49■□□□□ 0.71
Ccdc30Q8BVF4 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc30Q8BVF4 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc30Q8BVF4 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc30Q8BVF4 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms