Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf4Q8BQZ5 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf4Q8BQZ5 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Cpsf4Q8BQZ5 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf4Q8BQZ5 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf4Q8BQZ5 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf4Q8BQZ5 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf4Q8BQZ5 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cpsf4Q8BQZ5 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cpsf4Q8BQZ5 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cpsf4Q8BQZ5 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cpsf4Q8BQZ5 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.71□□□□□ -0.05
Cpsf4Q8BQZ5 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cpsf4Q8BQZ5 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cpsf4Q8BQZ5 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cpsf4Q8BQZ5 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cpsf4Q8BQZ5 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Cpsf4Q8BQZ5 Gm18733-201ENSMUST00000173950 856 ntBASIC14.71□□□□□ -0.05
Cpsf4Q8BQZ5 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cpsf4Q8BQZ5 Gm6089-201ENSMUST00000197666 938 ntBASIC14.71□□□□□ -0.05
Cpsf4Q8BQZ5 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cpsf4Q8BQZ5 Gm2651-201ENSMUST00000203560 838 ntBASIC14.71□□□□□ -0.05
Cpsf4Q8BQZ5 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.71□□□□□ -0.05
Cpsf4Q8BQZ5 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cpsf4Q8BQZ5 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.71□□□□□ -0.05
Cpsf4Q8BQZ5 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Cpsf4Q8BQZ5 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Cpsf4Q8BQZ5 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cpsf4Q8BQZ5 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cpsf4Q8BQZ5 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cpsf4Q8BQZ5 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cpsf4Q8BQZ5 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cpsf4Q8BQZ5 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cpsf4Q8BQZ5 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Cpsf4Q8BQZ5 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cpsf4Q8BQZ5 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cpsf4Q8BQZ5 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Cpsf4Q8BQZ5 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cpsf4Q8BQZ5 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Cpsf4Q8BQZ5 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf4Q8BQZ5 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf4Q8BQZ5 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf4Q8BQZ5 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf4Q8BQZ5 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf4Q8BQZ5 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf4Q8BQZ5 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.7□□□□□ -0.06
Cpsf4Q8BQZ5 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf4Q8BQZ5 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf4Q8BQZ5 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf4Q8BQZ5 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf4Q8BQZ5 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Cpsf4Q8BQZ5 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Cpsf4Q8BQZ5 Gm15173-201ENSMUST00000122049 433 ntBASIC14.7□□□□□ -0.06
Cpsf4Q8BQZ5 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf4Q8BQZ5 Gm7230-201ENSMUST00000173026 815 ntBASIC14.7□□□□□ -0.06
Cpsf4Q8BQZ5 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.7□□□□□ -0.06
Cpsf4Q8BQZ5 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.7□□□□□ -0.06
Cpsf4Q8BQZ5 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf4Q8BQZ5 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.7□□□□□ -0.06
Cpsf4Q8BQZ5 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf4Q8BQZ5 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf4Q8BQZ5 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf4Q8BQZ5 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf4Q8BQZ5 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Cpsf4Q8BQZ5 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.7□□□□□ -0.06
Cpsf4Q8BQZ5 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf4Q8BQZ5 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf4Q8BQZ5 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf4Q8BQZ5 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf4Q8BQZ5 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf4Q8BQZ5 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf4Q8BQZ5 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf4Q8BQZ5 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf4Q8BQZ5 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.69□□□□□ -0.06
Cpsf4Q8BQZ5 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf4Q8BQZ5 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf4Q8BQZ5 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.69□□□□□ -0.06
Cpsf4Q8BQZ5 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
Cpsf4Q8BQZ5 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf4Q8BQZ5 AW822252-206ENSMUST00000208904 237 ntBASIC14.69□□□□□ -0.06
Cpsf4Q8BQZ5 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.69□□□□□ -0.06
Cpsf4Q8BQZ5 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf4Q8BQZ5 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Cpsf4Q8BQZ5 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.69□□□□□ -0.06
Cpsf4Q8BQZ5 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf4Q8BQZ5 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf4Q8BQZ5 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.69□□□□□ -0.06
Cpsf4Q8BQZ5 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.69□□□□□ -0.06
Cpsf4Q8BQZ5 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf4Q8BQZ5 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf4Q8BQZ5 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf4Q8BQZ5 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf4Q8BQZ5 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf4Q8BQZ5 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4Q8BQZ5 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4Q8BQZ5 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4Q8BQZ5 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4Q8BQZ5 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4Q8BQZ5 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4Q8BQZ5 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms