Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdhr3Q8BL00 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdhr3Q8BL00 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdhr3Q8BL00 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdhr3Q8BL00 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Cdhr3Q8BL00 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdhr3Q8BL00 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.25□□□□□ -0.29
Cdhr3Q8BL00 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdhr3Q8BL00 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdhr3Q8BL00 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdhr3Q8BL00 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Cdhr3Q8BL00 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdhr3Q8BL00 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdhr3Q8BL00 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdhr3Q8BL00 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.24□□□□□ -0.29
Cdhr3Q8BL00 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdhr3Q8BL00 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdhr3Q8BL00 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.24□□□□□ -0.29
Cdhr3Q8BL00 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Cdhr3Q8BL00 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.24□□□□□ -0.29
Cdhr3Q8BL00 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cdhr3Q8BL00 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdhr3Q8BL00 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cdhr3Q8BL00 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdhr3Q8BL00 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Cdhr3Q8BL00 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdhr3Q8BL00 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Cdhr3Q8BL00 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.24□□□□□ -0.29
Cdhr3Q8BL00 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cdhr3Q8BL00 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdhr3Q8BL00 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cdhr3Q8BL00 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdhr3Q8BL00 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdhr3Q8BL00 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdhr3Q8BL00 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdhr3Q8BL00 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdhr3Q8BL00 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.24□□□□□ -0.29
Cdhr3Q8BL00 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdhr3Q8BL00 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdhr3Q8BL00 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdhr3Q8BL00 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdhr3Q8BL00 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Cdhr3Q8BL00 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cdhr3Q8BL00 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdhr3Q8BL00 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Cdhr3Q8BL00 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cdhr3Q8BL00 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cdhr3Q8BL00 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdhr3Q8BL00 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Cdhr3Q8BL00 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cdhr3Q8BL00 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Cdhr3Q8BL00 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdhr3Q8BL00 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdhr3Q8BL00 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdhr3Q8BL00 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.23□□□□□ -0.29
Cdhr3Q8BL00 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Cdhr3Q8BL00 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.23□□□□□ -0.29
Cdhr3Q8BL00 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdhr3Q8BL00 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.23□□□□□ -0.29
Cdhr3Q8BL00 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.23□□□□□ -0.29
Cdhr3Q8BL00 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cdhr3Q8BL00 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cdhr3Q8BL00 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdhr3Q8BL00 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdhr3Q8BL00 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdhr3Q8BL00 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cdhr3Q8BL00 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdhr3Q8BL00 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdhr3Q8BL00 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdhr3Q8BL00 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdhr3Q8BL00 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdhr3Q8BL00 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdhr3Q8BL00 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdhr3Q8BL00 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdhr3Q8BL00 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdhr3Q8BL00 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdhr3Q8BL00 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cdhr3Q8BL00 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdhr3Q8BL00 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdhr3Q8BL00 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdhr3Q8BL00 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdhr3Q8BL00 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.22□□□□□ -0.29
Cdhr3Q8BL00 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.22□□□□□ -0.29
Cdhr3Q8BL00 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cdhr3Q8BL00 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdhr3Q8BL00 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.22□□□□□ -0.29
Cdhr3Q8BL00 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cdhr3Q8BL00 Gm8318-201ENSMUST00000182954 872 ntBASIC13.22□□□□□ -0.29
Cdhr3Q8BL00 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Cdhr3Q8BL00 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cdhr3Q8BL00 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdhr3Q8BL00 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdhr3Q8BL00 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdhr3Q8BL00 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cdhr3Q8BL00 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdhr3Q8BL00 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdhr3Q8BL00 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdhr3Q8BL00 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdhr3Q8BL00 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdhr3Q8BL00 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms