Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 Gm25990-201ENSMUST00000102440 86 ntBASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 Gm28659-201ENSMUST00000188013 759 ntBASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 Gm6296-201ENSMUST00000222599 943 ntBASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Clrn3Q8BHH8 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clrn3Q8BHH8 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Clrn3Q8BHH8 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clrn3Q8BHH8 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Clrn3Q8BHH8 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clrn3Q8BHH8 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.24□□□□□ -0.13
Clrn3Q8BHH8 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clrn3Q8BHH8 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Clrn3Q8BHH8 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.24□□□□□ -0.13
Clrn3Q8BHH8 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clrn3Q8BHH8 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Clrn3Q8BHH8 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clrn3Q8BHH8 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.24□□□□□ -0.13
Clrn3Q8BHH8 Gm13418-201ENSMUST00000119097 944 ntBASIC14.24□□□□□ -0.13
Clrn3Q8BHH8 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.24□□□□□ -0.13
Clrn3Q8BHH8 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Clrn3Q8BHH8 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.24□□□□□ -0.13
Clrn3Q8BHH8 Gm6089-201ENSMUST00000197666 938 ntBASIC14.24□□□□□ -0.13
Clrn3Q8BHH8 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clrn3Q8BHH8 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Clrn3Q8BHH8 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clrn3Q8BHH8 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clrn3Q8BHH8 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Clrn3Q8BHH8 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.24□□□□□ -0.13
Clrn3Q8BHH8 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clrn3Q8BHH8 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clrn3Q8BHH8 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clrn3Q8BHH8 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clrn3Q8BHH8 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clrn3Q8BHH8 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clrn3Q8BHH8 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Clrn3Q8BHH8 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Clrn3Q8BHH8 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clrn3Q8BHH8 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clrn3Q8BHH8 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clrn3Q8BHH8 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clrn3Q8BHH8 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clrn3Q8BHH8 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clrn3Q8BHH8 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clrn3Q8BHH8 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clrn3Q8BHH8 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clrn3Q8BHH8 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clrn3Q8BHH8 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clrn3Q8BHH8 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Clrn3Q8BHH8 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clrn3Q8BHH8 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.23□□□□□ -0.13
Clrn3Q8BHH8 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.23□□□□□ -0.13
Clrn3Q8BHH8 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.23□□□□□ -0.13
Clrn3Q8BHH8 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Clrn3Q8BHH8 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clrn3Q8BHH8 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clrn3Q8BHH8 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clrn3Q8BHH8 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn3Q8BHH8 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.22□□□□□ -0.13
Clrn3Q8BHH8 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn3Q8BHH8 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.22□□□□□ -0.13
Clrn3Q8BHH8 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn3Q8BHH8 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn3Q8BHH8 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn3Q8BHH8 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms