Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Depdc1bQ8BH88 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Depdc1bQ8BH88 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Depdc1bQ8BH88 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Depdc1bQ8BH88 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Depdc1bQ8BH88 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Depdc1bQ8BH88 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.48■□□□□ 0.23
Depdc1bQ8BH88 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.48■□□□□ 0.23
Depdc1bQ8BH88 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.48■□□□□ 0.23
Depdc1bQ8BH88 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.48■□□□□ 0.23
Depdc1bQ8BH88 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.48■□□□□ 0.23
Depdc1bQ8BH88 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Depdc1bQ8BH88 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.48■□□□□ 0.23
Depdc1bQ8BH88 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Depdc1bQ8BH88 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Depdc1bQ8BH88 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Depdc1bQ8BH88 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.48■□□□□ 0.23
Depdc1bQ8BH88 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Depdc1bQ8BH88 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Depdc1bQ8BH88 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Depdc1bQ8BH88 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Depdc1bQ8BH88 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Depdc1bQ8BH88 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Depdc1bQ8BH88 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Depdc1bQ8BH88 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Depdc1bQ8BH88 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Depdc1bQ8BH88 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Depdc1bQ8BH88 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.47■□□□□ 0.23
Depdc1bQ8BH88 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Depdc1bQ8BH88 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Depdc1bQ8BH88 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Depdc1bQ8BH88 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Depdc1bQ8BH88 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Depdc1bQ8BH88 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Depdc1bQ8BH88 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Depdc1bQ8BH88 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.47■□□□□ 0.23
Depdc1bQ8BH88 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Depdc1bQ8BH88 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Depdc1bQ8BH88 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Depdc1bQ8BH88 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Depdc1bQ8BH88 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.47■□□□□ 0.23
Depdc1bQ8BH88 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Depdc1bQ8BH88 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.47■□□□□ 0.23
Depdc1bQ8BH88 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Depdc1bQ8BH88 Gm15590-201ENSMUST00000078419 552 ntBASIC16.47■□□□□ 0.23
Depdc1bQ8BH88 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Depdc1bQ8BH88 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Depdc1bQ8BH88 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Depdc1bQ8BH88 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Depdc1bQ8BH88 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Depdc1bQ8BH88 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Depdc1bQ8BH88 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Depdc1bQ8BH88 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Depdc1bQ8BH88 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Depdc1bQ8BH88 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Depdc1bQ8BH88 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Depdc1bQ8BH88 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Depdc1bQ8BH88 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.46■□□□□ 0.23
Depdc1bQ8BH88 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.46■□□□□ 0.23
Depdc1bQ8BH88 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Depdc1bQ8BH88 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Depdc1bQ8BH88 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Depdc1bQ8BH88 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.46■□□□□ 0.23
Depdc1bQ8BH88 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.46■□□□□ 0.23
Depdc1bQ8BH88 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Depdc1bQ8BH88 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Depdc1bQ8BH88 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Depdc1bQ8BH88 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Depdc1bQ8BH88 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Depdc1bQ8BH88 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Depdc1bQ8BH88 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Depdc1bQ8BH88 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Depdc1bQ8BH88 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Depdc1bQ8BH88 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Depdc1bQ8BH88 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Depdc1bQ8BH88 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.46■□□□□ 0.23
Depdc1bQ8BH88 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Depdc1bQ8BH88 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Depdc1bQ8BH88 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Depdc1bQ8BH88 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Depdc1bQ8BH88 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Depdc1bQ8BH88 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.46■□□□□ 0.23
Depdc1bQ8BH88 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Depdc1bQ8BH88 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Depdc1bQ8BH88 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Depdc1bQ8BH88 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Depdc1bQ8BH88 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Depdc1bQ8BH88 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Depdc1bQ8BH88 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Depdc1bQ8BH88 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.45■□□□□ 0.22
Depdc1bQ8BH88 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
Depdc1bQ8BH88 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Depdc1bQ8BH88 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.45■□□□□ 0.22
Depdc1bQ8BH88 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.45■□□□□ 0.22
Depdc1bQ8BH88 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.45■□□□□ 0.22
Depdc1bQ8BH88 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.45■□□□□ 0.22
Depdc1bQ8BH88 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.45■□□□□ 0.22
Depdc1bQ8BH88 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Depdc1bQ8BH88 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Depdc1bQ8BH88 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms