Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpp38Q80UU2 Gm12008-201ENSMUST00000117791 755 ntBASIC15.11■□□□□ 0.01
Rpp38Q80UU2 Gm1401-201ENSMUST00000122048 772 ntBASIC15.11■□□□□ 0.01
Rpp38Q80UU2 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.11■□□□□ 0.01
Rpp38Q80UU2 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.11■□□□□ 0.01
Rpp38Q80UU2 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.11■□□□□ 0.01
Rpp38Q80UU2 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.11■□□□□ 0.01
Rpp38Q80UU2 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.11■□□□□ 0.01
Rpp38Q80UU2 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.11■□□□□ 0.01
Rpp38Q80UU2 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rpp38Q80UU2 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rpp38Q80UU2 Psmb5-202ENSMUST00000227257 622 ntBASIC15.11■□□□□ 0.01
Rpp38Q80UU2 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpp38Q80UU2 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpp38Q80UU2 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpp38Q80UU2 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpp38Q80UU2 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Rpp38Q80UU2 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpp38Q80UU2 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpp38Q80UU2 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpp38Q80UU2 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpp38Q80UU2 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rpp38Q80UU2 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.11■□□□□ 0.01
Rpp38Q80UU2 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Rpp38Q80UU2 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpp38Q80UU2 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpp38Q80UU2 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpp38Q80UU2 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Rpp38Q80UU2 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rpp38Q80UU2 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Rpp38Q80UU2 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpp38Q80UU2 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpp38Q80UU2 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpp38Q80UU2 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpp38Q80UU2 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.1■□□□□ 0.01
Rpp38Q80UU2 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpp38Q80UU2 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpp38Q80UU2 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rpp38Q80UU2 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpp38Q80UU2 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.1■□□□□ 0.01
Rpp38Q80UU2 Gm14140-201ENSMUST00000119999 995 ntBASIC15.1■□□□□ 0.01
Rpp38Q80UU2 Gm13597-201ENSMUST00000121239 375 ntBASIC15.1■□□□□ 0.01
Rpp38Q80UU2 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.1■□□□□ 0.01
Rpp38Q80UU2 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.1■□□□□ 0.01
Rpp38Q80UU2 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.1■□□□□ 0.01
Rpp38Q80UU2 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rpp38Q80UU2 Gm2272-201ENSMUST00000194903 582 ntBASIC15.1■□□□□ 0.01
Rpp38Q80UU2 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rpp38Q80UU2 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rpp38Q80UU2 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpp38Q80UU2 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpp38Q80UU2 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpp38Q80UU2 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpp38Q80UU2 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rpp38Q80UU2 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rpp38Q80UU2 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rpp38Q80UU2 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpp38Q80UU2 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rpp38Q80UU2 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.09■□□□□ 0.01
Rpp38Q80UU2 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Rpp38Q80UU2 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.09■□□□□ 0.01
Rpp38Q80UU2 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpp38Q80UU2 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Rpp38Q80UU2 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpp38Q80UU2 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpp38Q80UU2 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpp38Q80UU2 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpp38Q80UU2 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.09■□□□□ 0.01
Rpp38Q80UU2 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpp38Q80UU2 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Rpp38Q80UU2 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpp38Q80UU2 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpp38Q80UU2 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rpp38Q80UU2 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Rpp38Q80UU2 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpp38Q80UU2 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpp38Q80UU2 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpp38Q80UU2 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpp38Q80UU2 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpp38Q80UU2 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpp38Q80UU2 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpp38Q80UU2 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Rpp38Q80UU2 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rpp38Q80UU2 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rpp38Q80UU2 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rpp38Q80UU2 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rpp38Q80UU2 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rpp38Q80UU2 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rpp38Q80UU2 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rpp38Q80UU2 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Rpp38Q80UU2 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rpp38Q80UU2 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rpp38Q80UU2 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rpp38Q80UU2 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Rpp38Q80UU2 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rpp38Q80UU2 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.08■□□□□ 0
Rpp38Q80UU2 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.08■□□□□ 0
Rpp38Q80UU2 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rpp38Q80UU2 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rpp38Q80UU2 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms