Protein–RNA interactions for Protein: Q80TP3

Ubr5, E3 ubiquitin-protein ligase UBR5, mousemouse

Predictions only

Length 2,792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr5Q80TP3 Gm12585-201ENSMUST00000117307 290 ntBASIC12.89□□□□□ -0.35
Ubr5Q80TP3 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ubr5Q80TP3 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ubr5Q80TP3 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ubr5Q80TP3 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.89□□□□□ -0.35
Ubr5Q80TP3 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.89□□□□□ -0.35
Ubr5Q80TP3 Gm10012-201ENSMUST00000078252 192 ntBASIC12.89□□□□□ -0.35
Ubr5Q80TP3 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.89□□□□□ -0.35
Ubr5Q80TP3 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ubr5Q80TP3 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubr5Q80TP3 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubr5Q80TP3 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Ubr5Q80TP3 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubr5Q80TP3 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.88□□□□□ -0.35
Ubr5Q80TP3 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubr5Q80TP3 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC12.88□□□□□ -0.35
Ubr5Q80TP3 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubr5Q80TP3 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubr5Q80TP3 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubr5Q80TP3 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Ubr5Q80TP3 Gm44832-201ENSMUST00000208849 2303 ntBASIC12.88□□□□□ -0.35
Ubr5Q80TP3 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.88□□□□□ -0.35
Ubr5Q80TP3 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubr5Q80TP3 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ubr5Q80TP3 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ubr5Q80TP3 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.88□□□□□ -0.35
Ubr5Q80TP3 Gm29127-201ENSMUST00000188304 517 ntBASIC12.88□□□□□ -0.35
Ubr5Q80TP3 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubr5Q80TP3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubr5Q80TP3 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Ubr5Q80TP3 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubr5Q80TP3 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ubr5Q80TP3 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.87□□□□□ -0.35
Ubr5Q80TP3 Gm18307-201ENSMUST00000206864 949 ntBASIC12.87□□□□□ -0.35
Ubr5Q80TP3 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.87□□□□□ -0.35
Ubr5Q80TP3 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubr5Q80TP3 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ubr5Q80TP3 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubr5Q80TP3 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Ubr5Q80TP3 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubr5Q80TP3 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ubr5Q80TP3 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubr5Q80TP3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Ubr5Q80TP3 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubr5Q80TP3 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ubr5Q80TP3 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubr5Q80TP3 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubr5Q80TP3 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.87□□□□□ -0.35
Ubr5Q80TP3 Gm2451-201ENSMUST00000199447 999 ntBASIC12.87□□□□□ -0.35
Ubr5Q80TP3 Gm10290-201ENSMUST00000200451 999 ntBASIC12.87□□□□□ -0.35
Ubr5Q80TP3 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubr5Q80TP3 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubr5Q80TP3 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubr5Q80TP3 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubr5Q80TP3 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubr5Q80TP3 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubr5Q80TP3 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubr5Q80TP3 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Ubr5Q80TP3 Gm12176-201ENSMUST00000121420 875 ntBASIC12.86□□□□□ -0.35
Ubr5Q80TP3 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubr5Q80TP3 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubr5Q80TP3 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.86□□□□□ -0.35
Ubr5Q80TP3 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ubr5Q80TP3 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.86□□□□□ -0.35
Ubr5Q80TP3 Gm45098-201ENSMUST00000207179 657 ntBASIC12.86□□□□□ -0.35
Ubr5Q80TP3 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Ubr5Q80TP3 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubr5Q80TP3 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC12.86□□□□□ -0.35
Ubr5Q80TP3 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.86□□□□□ -0.35
Ubr5Q80TP3 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubr5Q80TP3 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubr5Q80TP3 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubr5Q80TP3 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubr5Q80TP3 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubr5Q80TP3 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubr5Q80TP3 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ubr5Q80TP3 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubr5Q80TP3 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.86□□□□□ -0.35
Ubr5Q80TP3 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.86□□□□□ -0.35
Ubr5Q80TP3 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubr5Q80TP3 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.86□□□□□ -0.35
Ubr5Q80TP3 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubr5Q80TP3 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ubr5Q80TP3 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ubr5Q80TP3 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubr5Q80TP3 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.86□□□□□ -0.35
Ubr5Q80TP3 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubr5Q80TP3 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubr5Q80TP3 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.86□□□□□ -0.35
Ubr5Q80TP3 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.86□□□□□ -0.35
Ubr5Q80TP3 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.86□□□□□ -0.35
Ubr5Q80TP3 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubr5Q80TP3 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubr5Q80TP3 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ubr5Q80TP3 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Ubr5Q80TP3 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.86□□□□□ -0.35
Ubr5Q80TP3 Gm26596-201ENSMUST00000180464 2655 ntBASIC12.86□□□□□ -0.35
Ubr5Q80TP3 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ubr5Q80TP3 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ubr5Q80TP3 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms