Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cspg5Q71M36 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cspg5Q71M36 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Cspg5Q71M36 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cspg5Q71M36 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cspg5Q71M36 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cspg5Q71M36 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cspg5Q71M36 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cspg5Q71M36 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cspg5Q71M36 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cspg5Q71M36 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cspg5Q71M36 Mir1895-201ENSMUST00000122615 79 ntBASIC15.71■□□□□ 0.11
Cspg5Q71M36 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cspg5Q71M36 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cspg5Q71M36 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Cspg5Q71M36 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cspg5Q71M36 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Cspg5Q71M36 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cspg5Q71M36 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Cspg5Q71M36 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cspg5Q71M36 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.71■□□□□ 0.1
Cspg5Q71M36 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Cspg5Q71M36 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cspg5Q71M36 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cspg5Q71M36 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Cspg5Q71M36 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cspg5Q71M36 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cspg5Q71M36 Gm11745-201ENSMUST00000121669 448 ntBASIC15.7■□□□□ 0.1
Cspg5Q71M36 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cspg5Q71M36 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC15.7■□□□□ 0.1
Cspg5Q71M36 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.7■□□□□ 0.1
Cspg5Q71M36 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.7■□□□□ 0.1
Cspg5Q71M36 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.7■□□□□ 0.1
Cspg5Q71M36 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.7■□□□□ 0.1
Cspg5Q71M36 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Cspg5Q71M36 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cspg5Q71M36 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cspg5Q71M36 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cspg5Q71M36 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cspg5Q71M36 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cspg5Q71M36 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Cspg5Q71M36 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cspg5Q71M36 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cspg5Q71M36 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cspg5Q71M36 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.69■□□□□ 0.1
Cspg5Q71M36 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cspg5Q71M36 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cspg5Q71M36 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Cspg5Q71M36 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cspg5Q71M36 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cspg5Q71M36 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.69■□□□□ 0.1
Cspg5Q71M36 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cspg5Q71M36 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cspg5Q71M36 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cspg5Q71M36 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cspg5Q71M36 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cspg5Q71M36 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cspg5Q71M36 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cspg5Q71M36 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cspg5Q71M36 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cspg5Q71M36 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cspg5Q71M36 Gm13365-201ENSMUST00000121188 973 ntBASIC15.69■□□□□ 0.1
Cspg5Q71M36 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cspg5Q71M36 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Cspg5Q71M36 Wdyhv1-206ENSMUST00000227142 786 ntBASIC15.69■□□□□ 0.1
Cspg5Q71M36 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cspg5Q71M36 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cspg5Q71M36 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Cspg5Q71M36 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cspg5Q71M36 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cspg5Q71M36 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cspg5Q71M36 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cspg5Q71M36 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.68■□□□□ 0.1
Cspg5Q71M36 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cspg5Q71M36 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cspg5Q71M36 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cspg5Q71M36 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cspg5Q71M36 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cspg5Q71M36 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cspg5Q71M36 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Cspg5Q71M36 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cspg5Q71M36 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.68■□□□□ 0.1
Cspg5Q71M36 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cspg5Q71M36 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.68■□□□□ 0.1
Cspg5Q71M36 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.68■□□□□ 0.1
Cspg5Q71M36 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cspg5Q71M36 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cspg5Q71M36 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.68■□□□□ 0.1
Cspg5Q71M36 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cspg5Q71M36 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cspg5Q71M36 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cspg5Q71M36 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Cspg5Q71M36 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cspg5Q71M36 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cspg5Q71M36 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cspg5Q71M36 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cspg5Q71M36 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cspg5Q71M36 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cspg5Q71M36 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cspg5Q71M36 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms