Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Dhx40Q6PE54 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Dhx40Q6PE54 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Dhx40Q6PE54 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Dhx40Q6PE54 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Dhx40Q6PE54 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Dhx40Q6PE54 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Dhx40Q6PE54 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Dhx40Q6PE54 Gm4459-201ENSMUST00000118750 468 ntBASIC16.84■□□□□ 0.29
Dhx40Q6PE54 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Dhx40Q6PE54 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.84■□□□□ 0.29
Dhx40Q6PE54 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Dhx40Q6PE54 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.84■□□□□ 0.29
Dhx40Q6PE54 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
Dhx40Q6PE54 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
Dhx40Q6PE54 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
Dhx40Q6PE54 Gm8318-201ENSMUST00000182954 872 ntBASIC16.84■□□□□ 0.29
Dhx40Q6PE54 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Dhx40Q6PE54 Gm7506-201ENSMUST00000207758 815 ntBASIC16.84■□□□□ 0.29
Dhx40Q6PE54 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Dhx40Q6PE54 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.84■□□□□ 0.29
Dhx40Q6PE54 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.84■□□□□ 0.29
Dhx40Q6PE54 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.84■□□□□ 0.29
Dhx40Q6PE54 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Dhx40Q6PE54 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Dhx40Q6PE54 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.84■□□□□ 0.29
Dhx40Q6PE54 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Dhx40Q6PE54 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Dhx40Q6PE54 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Dhx40Q6PE54 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Dhx40Q6PE54 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Dhx40Q6PE54 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
Dhx40Q6PE54 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Dhx40Q6PE54 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Dhx40Q6PE54 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Dhx40Q6PE54 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Dhx40Q6PE54 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.83■□□□□ 0.28
Dhx40Q6PE54 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.83■□□□□ 0.28
Dhx40Q6PE54 Gm15165-201ENSMUST00000118140 502 ntBASIC16.83■□□□□ 0.28
Dhx40Q6PE54 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.83■□□□□ 0.28
Dhx40Q6PE54 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.83■□□□□ 0.28
Dhx40Q6PE54 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Dhx40Q6PE54 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Dhx40Q6PE54 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.83■□□□□ 0.28
Dhx40Q6PE54 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Dhx40Q6PE54 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Dhx40Q6PE54 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Dhx40Q6PE54 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Dhx40Q6PE54 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Dhx40Q6PE54 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Dhx40Q6PE54 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Dhx40Q6PE54 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Dhx40Q6PE54 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.83■□□□□ 0.28
Dhx40Q6PE54 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.83■□□□□ 0.28
Dhx40Q6PE54 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.83■□□□□ 0.28
Dhx40Q6PE54 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.83■□□□□ 0.28
Dhx40Q6PE54 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Dhx40Q6PE54 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Dhx40Q6PE54 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Dhx40Q6PE54 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Dhx40Q6PE54 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Dhx40Q6PE54 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.82■□□□□ 0.28
Dhx40Q6PE54 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Dhx40Q6PE54 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Dhx40Q6PE54 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Dhx40Q6PE54 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Dhx40Q6PE54 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Dhx40Q6PE54 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Dhx40Q6PE54 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Dhx40Q6PE54 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Dhx40Q6PE54 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.82■□□□□ 0.28
Dhx40Q6PE54 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Dhx40Q6PE54 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.82■□□□□ 0.28
Dhx40Q6PE54 Gm27867-201ENSMUST00000184778 125 ntBASIC16.82■□□□□ 0.28
Dhx40Q6PE54 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.82■□□□□ 0.28
Dhx40Q6PE54 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.82■□□□□ 0.28
Dhx40Q6PE54 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Dhx40Q6PE54 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Dhx40Q6PE54 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Dhx40Q6PE54 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Dhx40Q6PE54 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Dhx40Q6PE54 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Dhx40Q6PE54 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Dhx40Q6PE54 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Dhx40Q6PE54 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.81■□□□□ 0.28
Dhx40Q6PE54 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Dhx40Q6PE54 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Dhx40Q6PE54 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Dhx40Q6PE54 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Dhx40Q6PE54 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Dhx40Q6PE54 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Dhx40Q6PE54 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Dhx40Q6PE54 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Dhx40Q6PE54 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Dhx40Q6PE54 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Dhx40Q6PE54 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Dhx40Q6PE54 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.81■□□□□ 0.28
Dhx40Q6PE54 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.81■□□□□ 0.28
Dhx40Q6PE54 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Dhx40Q6PE54 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms