Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Snrnp40Q6PE01 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Snrnp40Q6PE01 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Snrnp40Q6PE01 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Snrnp40Q6PE01 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Snrnp40Q6PE01 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Snrnp40Q6PE01 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Snrnp40Q6PE01 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Snrnp40Q6PE01 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Snrnp40Q6PE01 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Snrnp40Q6PE01 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Snrnp40Q6PE01 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Snrnp40Q6PE01 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Snrnp40Q6PE01 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Snrnp40Q6PE01 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Snrnp40Q6PE01 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Snrnp40Q6PE01 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.27□□□□□ -0.29
Snrnp40Q6PE01 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Snrnp40Q6PE01 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Snrnp40Q6PE01 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Snrnp40Q6PE01 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Snrnp40Q6PE01 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.27□□□□□ -0.29
Snrnp40Q6PE01 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Snrnp40Q6PE01 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Snrnp40Q6PE01 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.27□□□□□ -0.29
Snrnp40Q6PE01 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.27□□□□□ -0.29
Snrnp40Q6PE01 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Snrnp40Q6PE01 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.27□□□□□ -0.29
Snrnp40Q6PE01 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Snrnp40Q6PE01 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.27□□□□□ -0.29
Snrnp40Q6PE01 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Snrnp40Q6PE01 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Snrnp40Q6PE01 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Snrnp40Q6PE01 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Snrnp40Q6PE01 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Snrnp40Q6PE01 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Snrnp40Q6PE01 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Snrnp40Q6PE01 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Snrnp40Q6PE01 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Snrnp40Q6PE01 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Snrnp40Q6PE01 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Snrnp40Q6PE01 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Snrnp40Q6PE01 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Snrnp40Q6PE01 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Snrnp40Q6PE01 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Snrnp40Q6PE01 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Snrnp40Q6PE01 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.26□□□□□ -0.29
Snrnp40Q6PE01 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Snrnp40Q6PE01 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Snrnp40Q6PE01 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Snrnp40Q6PE01 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Snrnp40Q6PE01 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Snrnp40Q6PE01 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Snrnp40Q6PE01 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Snrnp40Q6PE01 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.26□□□□□ -0.29
Snrnp40Q6PE01 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Snrnp40Q6PE01 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Snrnp40Q6PE01 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Snrnp40Q6PE01 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Snrnp40Q6PE01 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Snrnp40Q6PE01 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Snrnp40Q6PE01 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Snrnp40Q6PE01 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.25□□□□□ -0.29
Snrnp40Q6PE01 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Snrnp40Q6PE01 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Snrnp40Q6PE01 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Snrnp40Q6PE01 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.25□□□□□ -0.29
Snrnp40Q6PE01 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.25□□□□□ -0.29
Snrnp40Q6PE01 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Snrnp40Q6PE01 Gm12490-201ENSMUST00000120255 560 ntBASIC13.25□□□□□ -0.29
Snrnp40Q6PE01 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Snrnp40Q6PE01 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Snrnp40Q6PE01 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Snrnp40Q6PE01 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.25□□□□□ -0.29
Snrnp40Q6PE01 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Snrnp40Q6PE01 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Snrnp40Q6PE01 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.25□□□□□ -0.29
Snrnp40Q6PE01 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Snrnp40Q6PE01 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Snrnp40Q6PE01 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Snrnp40Q6PE01 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Snrnp40Q6PE01 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Snrnp40Q6PE01 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Snrnp40Q6PE01 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Snrnp40Q6PE01 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Snrnp40Q6PE01 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Snrnp40Q6PE01 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Snrnp40Q6PE01 Gm45244-201ENSMUST00000211328 2200 ntBASIC13.25□□□□□ -0.29
Snrnp40Q6PE01 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Snrnp40Q6PE01 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Snrnp40Q6PE01 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Snrnp40Q6PE01 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Snrnp40Q6PE01 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Snrnp40Q6PE01 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Snrnp40Q6PE01 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Snrnp40Q6PE01 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Snrnp40Q6PE01 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Snrnp40Q6PE01 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Snrnp40Q6PE01 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Snrnp40Q6PE01 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms