Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcd3Q6P9Z1 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd3Q6P9Z1 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd3Q6P9Z1 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd3Q6P9Z1 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd3Q6P9Z1 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd3Q6P9Z1 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd3Q6P9Z1 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd3Q6P9Z1 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd3Q6P9Z1 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.92□□□□□ -0.18
Smarcd3Q6P9Z1 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd3Q6P9Z1 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd3Q6P9Z1 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.92□□□□□ -0.18
Smarcd3Q6P9Z1 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.92□□□□□ -0.18
Smarcd3Q6P9Z1 Gm15165-201ENSMUST00000118140 502 ntBASIC13.92□□□□□ -0.18
Smarcd3Q6P9Z1 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd3Q6P9Z1 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd3Q6P9Z1 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd3Q6P9Z1 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd3Q6P9Z1 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd3Q6P9Z1 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd3Q6P9Z1 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd3Q6P9Z1 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd3Q6P9Z1 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd3Q6P9Z1 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd3Q6P9Z1 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd3Q6P9Z1 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.91□□□□□ -0.18
Smarcd3Q6P9Z1 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcd3Q6P9Z1 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcd3Q6P9Z1 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcd3Q6P9Z1 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcd3Q6P9Z1 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcd3Q6P9Z1 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Smarcd3Q6P9Z1 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcd3Q6P9Z1 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcd3Q6P9Z1 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcd3Q6P9Z1 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcd3Q6P9Z1 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Smarcd3Q6P9Z1 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Smarcd3Q6P9Z1 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.91□□□□□ -0.18
Smarcd3Q6P9Z1 Gm25745-201ENSMUST00000174945 133 ntBASIC13.91□□□□□ -0.18
Smarcd3Q6P9Z1 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Smarcd3Q6P9Z1 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Smarcd3Q6P9Z1 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Smarcd3Q6P9Z1 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.91□□□□□ -0.18
Smarcd3Q6P9Z1 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC13.91□□□□□ -0.18
Smarcd3Q6P9Z1 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcd3Q6P9Z1 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcd3Q6P9Z1 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcd3Q6P9Z1 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcd3Q6P9Z1 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.91□□□□□ -0.18
Smarcd3Q6P9Z1 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcd3Q6P9Z1 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcd3Q6P9Z1 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Smarcd3Q6P9Z1 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Smarcd3Q6P9Z1 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcd3Q6P9Z1 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcd3Q6P9Z1 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcd3Q6P9Z1 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcd3Q6P9Z1 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcd3Q6P9Z1 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Smarcd3Q6P9Z1 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcd3Q6P9Z1 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcd3Q6P9Z1 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcd3Q6P9Z1 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcd3Q6P9Z1 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcd3Q6P9Z1 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Smarcd3Q6P9Z1 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.9□□□□□ -0.18
Smarcd3Q6P9Z1 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcd3Q6P9Z1 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.9□□□□□ -0.18
Smarcd3Q6P9Z1 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcd3Q6P9Z1 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcd3Q6P9Z1 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcd3Q6P9Z1 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcd3Q6P9Z1 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
Smarcd3Q6P9Z1 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcd3Q6P9Z1 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcd3Q6P9Z1 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcd3Q6P9Z1 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcd3Q6P9Z1 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcd3Q6P9Z1 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcd3Q6P9Z1 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcd3Q6P9Z1 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcd3Q6P9Z1 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
Smarcd3Q6P9Z1 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.9□□□□□ -0.19
Smarcd3Q6P9Z1 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd3Q6P9Z1 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Smarcd3Q6P9Z1 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd3Q6P9Z1 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd3Q6P9Z1 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd3Q6P9Z1 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd3Q6P9Z1 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd3Q6P9Z1 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd3Q6P9Z1 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd3Q6P9Z1 Gm8344-201ENSMUST00000119813 856 ntBASIC13.89□□□□□ -0.19
Smarcd3Q6P9Z1 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd3Q6P9Z1 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.89□□□□□ -0.19
Smarcd3Q6P9Z1 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd3Q6P9Z1 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd3Q6P9Z1 Gm18622-201ENSMUST00000219361 595 ntBASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms