Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.57■□□□□ 0.08
Krt42Q6IFX2 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Krt42Q6IFX2 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Krt42Q6IFX2 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Krt42Q6IFX2 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Krt42Q6IFX2 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.57■□□□□ 0.08
Krt42Q6IFX2 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Krt42Q6IFX2 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Krt42Q6IFX2 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Krt42Q6IFX2 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.57■□□□□ 0.08
Krt42Q6IFX2 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Krt42Q6IFX2 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.57■□□□□ 0.08
Krt42Q6IFX2 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Krt42Q6IFX2 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Krt42Q6IFX2 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Krt42Q6IFX2 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Krt42Q6IFX2 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Krt42Q6IFX2 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Krt42Q6IFX2 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Krt42Q6IFX2 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Krt42Q6IFX2 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Krt42Q6IFX2 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Krt42Q6IFX2 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Krt42Q6IFX2 Gm25406-201ENSMUST00000157599 105 ntBASIC15.56■□□□□ 0.08
Krt42Q6IFX2 Mir5130-201ENSMUST00000175160 84 ntBASIC15.56■□□□□ 0.08
Krt42Q6IFX2 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Krt42Q6IFX2 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Krt42Q6IFX2 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Krt42Q6IFX2 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Krt42Q6IFX2 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.56■□□□□ 0.08
Krt42Q6IFX2 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Krt42Q6IFX2 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Krt42Q6IFX2 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Krt42Q6IFX2 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Krt42Q6IFX2 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Krt42Q6IFX2 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Krt42Q6IFX2 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
Krt42Q6IFX2 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Krt42Q6IFX2 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Krt42Q6IFX2 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Krt42Q6IFX2 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Krt42Q6IFX2 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.56■□□□□ 0.08
Krt42Q6IFX2 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Krt42Q6IFX2 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Krt42Q6IFX2 AC166574.6-201ENSMUST00000227889 1806 ntBASIC15.55■□□□□ 0.08
Krt42Q6IFX2 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Krt42Q6IFX2 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Krt42Q6IFX2 Gm14722-201ENSMUST00000118943 689 ntBASIC15.55■□□□□ 0.08
Krt42Q6IFX2 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.55■□□□□ 0.08
Krt42Q6IFX2 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.55■□□□□ 0.08
Krt42Q6IFX2 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Krt42Q6IFX2 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.55■□□□□ 0.08
Krt42Q6IFX2 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Krt42Q6IFX2 CT025689.6-201ENSMUST00000224991 1104 ntBASIC15.55■□□□□ 0.08
Krt42Q6IFX2 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Krt42Q6IFX2 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Krt42Q6IFX2 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Krt42Q6IFX2 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.55■□□□□ 0.08
Krt42Q6IFX2 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Krt42Q6IFX2 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Krt42Q6IFX2 Matn2-206ENSMUST00000228570 2798 ntBASIC15.55■□□□□ 0.08
Krt42Q6IFX2 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Krt42Q6IFX2 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Krt42Q6IFX2 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Krt42Q6IFX2 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Krt42Q6IFX2 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
Krt42Q6IFX2 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Krt42Q6IFX2 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Krt42Q6IFX2 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
Krt42Q6IFX2 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Krt42Q6IFX2 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Krt42Q6IFX2 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Krt42Q6IFX2 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Krt42Q6IFX2 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Krt42Q6IFX2 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Krt42Q6IFX2 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Krt42Q6IFX2 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Krt42Q6IFX2 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Krt42Q6IFX2 Gm13559-201ENSMUST00000120476 863 ntBASIC15.54■□□□□ 0.08
Krt42Q6IFX2 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Krt42Q6IFX2 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.54■□□□□ 0.08
Krt42Q6IFX2 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.54■□□□□ 0.08
Krt42Q6IFX2 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Krt42Q6IFX2 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Krt42Q6IFX2 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Krt42Q6IFX2 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Krt42Q6IFX2 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Krt42Q6IFX2 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Krt42Q6IFX2 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Krt42Q6IFX2 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Krt42Q6IFX2 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Krt42Q6IFX2 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Krt42Q6IFX2 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Krt42Q6IFX2 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Krt42Q6IFX2 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Krt42Q6IFX2 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Krt42Q6IFX2 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.53■□□□□ 0.08
Krt42Q6IFX2 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.53■□□□□ 0.08
Krt42Q6IFX2 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Krt42Q6IFX2 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms