Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AtmQ62388 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
AtmQ62388 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AtmQ62388 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC14.14□□□□□ -0.15
AtmQ62388 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
AtmQ62388 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC14.14□□□□□ -0.15
AtmQ62388 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
AtmQ62388 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.14□□□□□ -0.15
AtmQ62388 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
AtmQ62388 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.14□□□□□ -0.15
AtmQ62388 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
AtmQ62388 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
AtmQ62388 Gm24543-201ENSMUST00000103867 82 ntBASIC14.14□□□□□ -0.15
AtmQ62388 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
AtmQ62388 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.14□□□□□ -0.15
AtmQ62388 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
AtmQ62388 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.14□□□□□ -0.15
AtmQ62388 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AtmQ62388 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AtmQ62388 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
AtmQ62388 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AtmQ62388 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AtmQ62388 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AtmQ62388 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
AtmQ62388 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
AtmQ62388 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.13□□□□□ -0.15
AtmQ62388 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
AtmQ62388 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
AtmQ62388 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
AtmQ62388 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AtmQ62388 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AtmQ62388 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AtmQ62388 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AtmQ62388 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.13□□□□□ -0.15
AtmQ62388 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.13□□□□□ -0.15
AtmQ62388 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
AtmQ62388 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AtmQ62388 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.13□□□□□ -0.15
AtmQ62388 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.13□□□□□ -0.15
AtmQ62388 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
AtmQ62388 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AtmQ62388 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
AtmQ62388 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
AtmQ62388 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
AtmQ62388 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
AtmQ62388 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
AtmQ62388 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
AtmQ62388 Gm9002-201ENSMUST00000178437 499 ntBASIC14.13□□□□□ -0.15
AtmQ62388 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
AtmQ62388 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
AtmQ62388 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AtmQ62388 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
AtmQ62388 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
AtmQ62388 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
AtmQ62388 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
AtmQ62388 Gm12091-201ENSMUST00000146791 830 ntBASIC14.12□□□□□ -0.15
AtmQ62388 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AtmQ62388 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.12□□□□□ -0.15
AtmQ62388 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.12□□□□□ -0.15
AtmQ62388 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AtmQ62388 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
AtmQ62388 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AtmQ62388 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
AtmQ62388 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AtmQ62388 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AtmQ62388 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.12□□□□□ -0.15
AtmQ62388 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
AtmQ62388 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.12□□□□□ -0.15
AtmQ62388 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.12□□□□□ -0.15
AtmQ62388 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.12□□□□□ -0.15
AtmQ62388 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.12□□□□□ -0.15
AtmQ62388 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AtmQ62388 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.12□□□□□ -0.15
AtmQ62388 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AtmQ62388 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.12□□□□□ -0.15
AtmQ62388 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AtmQ62388 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
AtmQ62388 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AtmQ62388 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
AtmQ62388 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AtmQ62388 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
AtmQ62388 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AtmQ62388 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.11□□□□□ -0.15
AtmQ62388 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AtmQ62388 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
AtmQ62388 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
AtmQ62388 Gm6244-201ENSMUST00000178732 841 ntBASIC14.11□□□□□ -0.15
AtmQ62388 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AtmQ62388 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
AtmQ62388 Gm7172-201ENSMUST00000218047 1152 ntBASIC14.11□□□□□ -0.15
AtmQ62388 AC159747.1-201ENSMUST00000219903 265 ntBASIC14.11□□□□□ -0.15
AtmQ62388 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.11□□□□□ -0.15
AtmQ62388 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AtmQ62388 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AtmQ62388 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AtmQ62388 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.11□□□□□ -0.15
AtmQ62388 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AtmQ62388 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AtmQ62388 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.11□□□□□ -0.15
AtmQ62388 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms