Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Notch3Q61982 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Notch3Q61982 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Notch3Q61982 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Notch3Q61982 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Notch3Q61982 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Notch3Q61982 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Notch3Q61982 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Notch3Q61982 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Notch3Q61982 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Notch3Q61982 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Notch3Q61982 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Notch3Q61982 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Notch3Q61982 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Notch3Q61982 Gm44443-201ENSMUST00000204396 5633 ntBASIC11.67□□□□□ -0.54
Notch3Q61982 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Notch3Q61982 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Notch3Q61982 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Notch3Q61982 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Notch3Q61982 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Notch3Q61982 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Notch3Q61982 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Notch3Q61982 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC11.67□□□□□ -0.54
Notch3Q61982 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC11.67□□□□□ -0.54
Notch3Q61982 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC11.67□□□□□ -0.54
Notch3Q61982 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Notch3Q61982 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Notch3Q61982 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Notch3Q61982 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Notch3Q61982 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Notch3Q61982 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Notch3Q61982 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC11.67□□□□□ -0.54
Notch3Q61982 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Notch3Q61982 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Notch3Q61982 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Notch3Q61982 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Notch3Q61982 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Notch3Q61982 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Notch3Q61982 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Notch3Q61982 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC11.66□□□□□ -0.54
Notch3Q61982 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.66□□□□□ -0.54
Notch3Q61982 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Notch3Q61982 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC11.66□□□□□ -0.54
Notch3Q61982 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Notch3Q61982 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Notch3Q61982 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC11.66□□□□□ -0.54
Notch3Q61982 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Notch3Q61982 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Notch3Q61982 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Notch3Q61982 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Notch3Q61982 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Notch3Q61982 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Notch3Q61982 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Notch3Q61982 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Notch3Q61982 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Notch3Q61982 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Notch3Q61982 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Notch3Q61982 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Notch3Q61982 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Notch3Q61982 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Notch3Q61982 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Notch3Q61982 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Notch3Q61982 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Notch3Q61982 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC11.66□□□□□ -0.54
Notch3Q61982 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Notch3Q61982 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Notch3Q61982 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Notch3Q61982 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Notch3Q61982 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Notch3Q61982 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Notch3Q61982 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Notch3Q61982 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Notch3Q61982 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Notch3Q61982 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Notch3Q61982 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Notch3Q61982 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Notch3Q61982 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
Notch3Q61982 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC11.65□□□□□ -0.54
Notch3Q61982 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Notch3Q61982 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Notch3Q61982 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Notch3Q61982 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Notch3Q61982 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Notch3Q61982 Gm8839-201ENSMUST00000121279 1645 ntBASIC11.65□□□□□ -0.54
Notch3Q61982 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Notch3Q61982 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Notch3Q61982 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Notch3Q61982 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Notch3Q61982 Fgf17-202ENSMUST00000227123 1336 ntBASIC11.65□□□□□ -0.54
Notch3Q61982 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Notch3Q61982 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Notch3Q61982 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Notch3Q61982 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Notch3Q61982 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Notch3Q61982 Gm28265-201ENSMUST00000188201 2319 ntBASIC11.65□□□□□ -0.54
Notch3Q61982 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Notch3Q61982 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Notch3Q61982 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Notch3Q61982 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Notch3Q61982 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms