Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ift88Q61371 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ift88Q61371 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ift88Q61371 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ift88Q61371 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.79■□□□□ 0.28
Ift88Q61371 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ift88Q61371 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ift88Q61371 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ift88Q61371 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ift88Q61371 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ift88Q61371 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ift88Q61371 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.78■□□□□ 0.28
Ift88Q61371 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ift88Q61371 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Ift88Q61371 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.78■□□□□ 0.28
Ift88Q61371 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ift88Q61371 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ift88Q61371 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ift88Q61371 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Ift88Q61371 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ift88Q61371 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ift88Q61371 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ift88Q61371 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ift88Q61371 Gm15372-201ENSMUST00000120729 834 ntBASIC16.78■□□□□ 0.28
Ift88Q61371 Gm12134-201ENSMUST00000122109 520 ntBASIC16.78■□□□□ 0.28
Ift88Q61371 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.78■□□□□ 0.28
Ift88Q61371 Gm8318-201ENSMUST00000182954 872 ntBASIC16.78■□□□□ 0.28
Ift88Q61371 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Ift88Q61371 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ift88Q61371 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.78■□□□□ 0.28
Ift88Q61371 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ift88Q61371 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.78■□□□□ 0.28
Ift88Q61371 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ift88Q61371 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.78■□□□□ 0.28
Ift88Q61371 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.78■□□□□ 0.28
Ift88Q61371 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ift88Q61371 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Ift88Q61371 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ift88Q61371 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ift88Q61371 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ift88Q61371 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ift88Q61371 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ift88Q61371 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ift88Q61371 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ift88Q61371 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ift88Q61371 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ift88Q61371 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ift88Q61371 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Ift88Q61371 Gm15358-201ENSMUST00000119249 520 ntBASIC16.77■□□□□ 0.28
Ift88Q61371 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ift88Q61371 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ift88Q61371 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.77■□□□□ 0.28
Ift88Q61371 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Ift88Q61371 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.77■□□□□ 0.28
Ift88Q61371 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.77■□□□□ 0.28
Ift88Q61371 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
Ift88Q61371 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.77■□□□□ 0.28
Ift88Q61371 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Ift88Q61371 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ift88Q61371 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ift88Q61371 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ift88Q61371 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ift88Q61371 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Ift88Q61371 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ift88Q61371 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ift88Q61371 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ift88Q61371 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Ift88Q61371 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ift88Q61371 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Ift88Q61371 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ift88Q61371 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.76■□□□□ 0.27
Ift88Q61371 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ift88Q61371 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC16.76■□□□□ 0.27
Ift88Q61371 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ift88Q61371 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Ift88Q61371 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ift88Q61371 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.76■□□□□ 0.27
Ift88Q61371 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ift88Q61371 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ift88Q61371 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ift88Q61371 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ift88Q61371 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ift88Q61371 Celf4-206ENSMUST00000224553 1729 ntBASIC16.76■□□□□ 0.27
Ift88Q61371 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.76■□□□□ 0.27
Ift88Q61371 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ift88Q61371 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ift88Q61371 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ift88Q61371 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Ift88Q61371 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ift88Q61371 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ift88Q61371 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ift88Q61371 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ift88Q61371 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ift88Q61371 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ift88Q61371 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ift88Q61371 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ift88Q61371 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ift88Q61371 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ift88Q61371 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ift88Q61371 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms