Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hcfc1Q61191 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hcfc1Q61191 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hcfc1Q61191 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hcfc1Q61191 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Hcfc1Q61191 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hcfc1Q61191 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hcfc1Q61191 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC12.59□□□□□ -0.39
Hcfc1Q61191 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Hcfc1Q61191 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Hcfc1Q61191 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Hcfc1Q61191 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.59□□□□□ -0.39
Hcfc1Q61191 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hcfc1Q61191 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hcfc1Q61191 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.59□□□□□ -0.39
Hcfc1Q61191 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hcfc1Q61191 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hcfc1Q61191 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hcfc1Q61191 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hcfc1Q61191 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hcfc1Q61191 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hcfc1Q61191 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hcfc1Q61191 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hcfc1Q61191 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hcfc1Q61191 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hcfc1Q61191 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC12.59□□□□□ -0.39
Hcfc1Q61191 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hcfc1Q61191 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Hcfc1Q61191 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Hcfc1Q61191 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hcfc1Q61191 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hcfc1Q61191 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Hcfc1Q61191 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Hcfc1Q61191 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.59□□□□□ -0.39
Hcfc1Q61191 Gm23984-201ENSMUST00000157139 203 ntBASIC12.59□□□□□ -0.39
Hcfc1Q61191 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hcfc1Q61191 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.59□□□□□ -0.39
Hcfc1Q61191 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Hcfc1Q61191 Gm45668-201ENSMUST00000211271 493 ntBASIC12.59□□□□□ -0.39
Hcfc1Q61191 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.59□□□□□ -0.39
Hcfc1Q61191 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hcfc1Q61191 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hcfc1Q61191 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hcfc1Q61191 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hcfc1Q61191 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Hcfc1Q61191 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hcfc1Q61191 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hcfc1Q61191 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Hcfc1Q61191 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.59□□□□□ -0.39
Hcfc1Q61191 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.58□□□□□ -0.39
Hcfc1Q61191 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hcfc1Q61191 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hcfc1Q61191 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hcfc1Q61191 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Hcfc1Q61191 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hcfc1Q61191 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hcfc1Q61191 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hcfc1Q61191 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hcfc1Q61191 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hcfc1Q61191 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Hcfc1Q61191 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Hcfc1Q61191 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Hcfc1Q61191 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.58□□□□□ -0.4
Hcfc1Q61191 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hcfc1Q61191 Gm18624-201ENSMUST00000220966 658 ntBASIC12.58□□□□□ -0.4
Hcfc1Q61191 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hcfc1Q61191 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hcfc1Q61191 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hcfc1Q61191 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.58□□□□□ -0.4
Hcfc1Q61191 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hcfc1Q61191 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hcfc1Q61191 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hcfc1Q61191 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hcfc1Q61191 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hcfc1Q61191 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hcfc1Q61191 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Hcfc1Q61191 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.57□□□□□ -0.4
Hcfc1Q61191 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hcfc1Q61191 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Hcfc1Q61191 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hcfc1Q61191 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hcfc1Q61191 Gm16476-201ENSMUST00000221544 139 ntBASIC12.57□□□□□ -0.4
Hcfc1Q61191 Gm9229-201ENSMUST00000222777 126 ntBASIC12.57□□□□□ -0.4
Hcfc1Q61191 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.57□□□□□ -0.4
Hcfc1Q61191 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.57□□□□□ -0.4
Hcfc1Q61191 Gm6180-201ENSMUST00000065243 498 ntBASIC12.57□□□□□ -0.4
Hcfc1Q61191 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hcfc1Q61191 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Hcfc1Q61191 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hcfc1Q61191 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hcfc1Q61191 Gm19430-201ENSMUST00000193847 2137 ntBASIC12.57□□□□□ -0.4
Hcfc1Q61191 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hcfc1Q61191 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hcfc1Q61191 Gm45244-201ENSMUST00000211328 2200 ntBASIC12.57□□□□□ -0.4
Hcfc1Q61191 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hcfc1Q61191 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hcfc1Q61191 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hcfc1Q61191 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hcfc1Q61191 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hcfc1Q61191 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms