Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.99□□□□□ -0.33
Clns1aQ61189 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Clns1aQ61189 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clns1aQ61189 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clns1aQ61189 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clns1aQ61189 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clns1aQ61189 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clns1aQ61189 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clns1aQ61189 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clns1aQ61189 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clns1aQ61189 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clns1aQ61189 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clns1aQ61189 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clns1aQ61189 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clns1aQ61189 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.98□□□□□ -0.33
Clns1aQ61189 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clns1aQ61189 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.98□□□□□ -0.33
Clns1aQ61189 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clns1aQ61189 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.98□□□□□ -0.33
Clns1aQ61189 Gm10812-201ENSMUST00000099864 546 ntBASIC12.98□□□□□ -0.33
Clns1aQ61189 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clns1aQ61189 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clns1aQ61189 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clns1aQ61189 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Clns1aQ61189 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Clns1aQ61189 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clns1aQ61189 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clns1aQ61189 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clns1aQ61189 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clns1aQ61189 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Clns1aQ61189 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clns1aQ61189 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clns1aQ61189 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clns1aQ61189 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clns1aQ61189 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clns1aQ61189 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.97□□□□□ -0.33
Clns1aQ61189 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clns1aQ61189 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Clns1aQ61189 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Clns1aQ61189 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clns1aQ61189 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clns1aQ61189 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Clns1aQ61189 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Clns1aQ61189 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clns1aQ61189 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clns1aQ61189 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.97□□□□□ -0.33
Clns1aQ61189 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clns1aQ61189 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clns1aQ61189 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clns1aQ61189 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clns1aQ61189 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clns1aQ61189 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Clns1aQ61189 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clns1aQ61189 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clns1aQ61189 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC12.97□□□□□ -0.33
Clns1aQ61189 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC12.97□□□□□ -0.33
Clns1aQ61189 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Clns1aQ61189 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clns1aQ61189 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Clns1aQ61189 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.97□□□□□ -0.33
Clns1aQ61189 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clns1aQ61189 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Clns1aQ61189 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clns1aQ61189 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clns1aQ61189 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Clns1aQ61189 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clns1aQ61189 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Clns1aQ61189 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clns1aQ61189 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Clns1aQ61189 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clns1aQ61189 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clns1aQ61189 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Clns1aQ61189 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clns1aQ61189 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clns1aQ61189 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clns1aQ61189 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clns1aQ61189 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clns1aQ61189 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Clns1aQ61189 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clns1aQ61189 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clns1aQ61189 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clns1aQ61189 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clns1aQ61189 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clns1aQ61189 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Clns1aQ61189 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Clns1aQ61189 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clns1aQ61189 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clns1aQ61189 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clns1aQ61189 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clns1aQ61189 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Clns1aQ61189 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Clns1aQ61189 Gm22240-201ENSMUST00000175225 82 ntBASIC12.96□□□□□ -0.33
Clns1aQ61189 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clns1aQ61189 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clns1aQ61189 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clns1aQ61189 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clns1aQ61189 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clns1aQ61189 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clns1aQ61189 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Clns1aQ61189 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms