Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.65■□□□□ 0.1
Foxd4Q60688 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxd4Q60688 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxd4Q60688 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxd4Q60688 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxd4Q60688 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxd4Q60688 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxd4Q60688 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxd4Q60688 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Foxd4Q60688 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Foxd4Q60688 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxd4Q60688 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxd4Q60688 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.65■□□□□ 0.1
Foxd4Q60688 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.65■□□□□ 0.1
Foxd4Q60688 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC15.65■□□□□ 0.1
Foxd4Q60688 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Foxd4Q60688 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.65■□□□□ 0.1
Foxd4Q60688 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Foxd4Q60688 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Foxd4Q60688 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.65■□□□□ 0.1
Foxd4Q60688 Gm36943-201ENSMUST00000194422 282 ntBASIC15.65■□□□□ 0.1
Foxd4Q60688 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC15.65■□□□□ 0.1
Foxd4Q60688 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxd4Q60688 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Foxd4Q60688 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxd4Q60688 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxd4Q60688 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxd4Q60688 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxd4Q60688 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxd4Q60688 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Foxd4Q60688 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.65■□□□□ 0.1
Foxd4Q60688 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.65■□□□□ 0.1
Foxd4Q60688 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxd4Q60688 BC037039-201ENSMUST00000192003 2205 ntBASIC15.64■□□□□ 0.09
Foxd4Q60688 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Foxd4Q60688 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Foxd4Q60688 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Foxd4Q60688 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Foxd4Q60688 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Foxd4Q60688 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Foxd4Q60688 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.64■□□□□ 0.09
Foxd4Q60688 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.64■□□□□ 0.09
Foxd4Q60688 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC15.64■□□□□ 0.09
Foxd4Q60688 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.64■□□□□ 0.09
Foxd4Q60688 Gm44953-201ENSMUST00000208745 1286 ntBASIC15.64■□□□□ 0.09
Foxd4Q60688 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC15.64■□□□□ 0.09
Foxd4Q60688 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.64■□□□□ 0.09
Foxd4Q60688 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.64■□□□□ 0.09
Foxd4Q60688 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Foxd4Q60688 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Foxd4Q60688 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Foxd4Q60688 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Foxd4Q60688 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Foxd4Q60688 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.64■□□□□ 0.09
Foxd4Q60688 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Foxd4Q60688 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Foxd4Q60688 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Foxd4Q60688 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Foxd4Q60688 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Foxd4Q60688 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.63■□□□□ 0.09
Foxd4Q60688 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Foxd4Q60688 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Foxd4Q60688 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Foxd4Q60688 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Foxd4Q60688 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Foxd4Q60688 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.63■□□□□ 0.09
Foxd4Q60688 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Foxd4Q60688 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC15.63■□□□□ 0.09
Foxd4Q60688 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.63■□□□□ 0.09
Foxd4Q60688 Gm5864-201ENSMUST00000202263 970 ntBASIC15.63■□□□□ 0.09
Foxd4Q60688 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.63■□□□□ 0.09
Foxd4Q60688 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Foxd4Q60688 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Foxd4Q60688 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Foxd4Q60688 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Foxd4Q60688 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Foxd4Q60688 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Foxd4Q60688 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Foxd4Q60688 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Foxd4Q60688 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Foxd4Q60688 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Foxd4Q60688 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Foxd4Q60688 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Foxd4Q60688 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Foxd4Q60688 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Foxd4Q60688 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.62■□□□□ 0.09
Foxd4Q60688 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Foxd4Q60688 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Foxd4Q60688 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Foxd4Q60688 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.62■□□□□ 0.09
Foxd4Q60688 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.62■□□□□ 0.09
Foxd4Q60688 Elobl-203ENSMUST00000121228 704 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Foxd4Q60688 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Foxd4Q60688 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.62■□□□□ 0.09
Foxd4Q60688 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Foxd4Q60688 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Foxd4Q60688 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Foxd4Q60688 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Foxd4Q60688 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Foxd4Q60688 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms