Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nr1h4Q60641 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.43□□□□□ -0.1
Nr1h4Q60641 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.43□□□□□ -0.1
Nr1h4Q60641 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nr1h4Q60641 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nr1h4Q60641 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nr1h4Q60641 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nr1h4Q60641 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Nr1h4Q60641 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nr1h4Q60641 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nr1h4Q60641 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nr1h4Q60641 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nr1h4Q60641 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Nr1h4Q60641 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.43□□□□□ -0.1
Nr1h4Q60641 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nr1h4Q60641 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nr1h4Q60641 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nr1h4Q60641 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nr1h4Q60641 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nr1h4Q60641 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nr1h4Q60641 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nr1h4Q60641 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nr1h4Q60641 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nr1h4Q60641 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nr1h4Q60641 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nr1h4Q60641 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nr1h4Q60641 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nr1h4Q60641 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nr1h4Q60641 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nr1h4Q60641 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nr1h4Q60641 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nr1h4Q60641 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Nr1h4Q60641 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nr1h4Q60641 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.42□□□□□ -0.1
Nr1h4Q60641 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Nr1h4Q60641 Gm10231-201ENSMUST00000181584 441 ntBASIC14.42□□□□□ -0.1
Nr1h4Q60641 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nr1h4Q60641 Gm10175-202ENSMUST00000208752 441 ntBASIC14.42□□□□□ -0.1
Nr1h4Q60641 Gm10252-201ENSMUST00000209541 832 ntBASIC14.42□□□□□ -0.1
Nr1h4Q60641 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nr1h4Q60641 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.42□□□□□ -0.1
Nr1h4Q60641 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.42□□□□□ -0.1
Nr1h4Q60641 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nr1h4Q60641 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.42□□□□□ -0.1
Nr1h4Q60641 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nr1h4Q60641 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nr1h4Q60641 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nr1h4Q60641 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nr1h4Q60641 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nr1h4Q60641 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nr1h4Q60641 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nr1h4Q60641 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nr1h4Q60641 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nr1h4Q60641 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nr1h4Q60641 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Nr1h4Q60641 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nr1h4Q60641 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Nr1h4Q60641 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nr1h4Q60641 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nr1h4Q60641 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Nr1h4Q60641 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.41□□□□□ -0.1
Nr1h4Q60641 Gm8344-201ENSMUST00000119813 856 ntBASIC14.41□□□□□ -0.1
Nr1h4Q60641 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.41□□□□□ -0.1
Nr1h4Q60641 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nr1h4Q60641 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nr1h4Q60641 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Nr1h4Q60641 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.41□□□□□ -0.1
Nr1h4Q60641 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nr1h4Q60641 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nr1h4Q60641 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nr1h4Q60641 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nr1h4Q60641 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr1h4Q60641 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr1h4Q60641 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr1h4Q60641 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Nr1h4Q60641 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nr1h4Q60641 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nr1h4Q60641 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr1h4Q60641 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr1h4Q60641 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nr1h4Q60641 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nr1h4Q60641 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr1h4Q60641 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nr1h4Q60641 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr1h4Q60641 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
Nr1h4Q60641 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nr1h4Q60641 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr1h4Q60641 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.4□□□□□ -0.1
Nr1h4Q60641 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Nr1h4Q60641 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr1h4Q60641 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nr1h4Q60641 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.4□□□□□ -0.1
Nr1h4Q60641 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr1h4Q60641 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nr1h4Q60641 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Nr1h4Q60641 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.4□□□□□ -0.1
Nr1h4Q60641 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nr1h4Q60641 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Nr1h4Q60641 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Nr1h4Q60641 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms