Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.11■□□□□ 0.17
Shroom1Q5SX79 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Shroom1Q5SX79 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom1Q5SX79 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom1Q5SX79 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Shroom1Q5SX79 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom1Q5SX79 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Shroom1Q5SX79 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom1Q5SX79 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom1Q5SX79 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Shroom1Q5SX79 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom1Q5SX79 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom1Q5SX79 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom1Q5SX79 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom1Q5SX79 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom1Q5SX79 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom1Q5SX79 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.11■□□□□ 0.17
Shroom1Q5SX79 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom1Q5SX79 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shroom1Q5SX79 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Shroom1Q5SX79 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shroom1Q5SX79 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Shroom1Q5SX79 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shroom1Q5SX79 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shroom1Q5SX79 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shroom1Q5SX79 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Shroom1Q5SX79 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Shroom1Q5SX79 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shroom1Q5SX79 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shroom1Q5SX79 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shroom1Q5SX79 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Shroom1Q5SX79 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shroom1Q5SX79 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Shroom1Q5SX79 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shroom1Q5SX79 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shroom1Q5SX79 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shroom1Q5SX79 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.1■□□□□ 0.17
Shroom1Q5SX79 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Shroom1Q5SX79 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shroom1Q5SX79 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Shroom1Q5SX79 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shroom1Q5SX79 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Shroom1Q5SX79 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.1■□□□□ 0.17
Shroom1Q5SX79 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Shroom1Q5SX79 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC16.1■□□□□ 0.17
Shroom1Q5SX79 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shroom1Q5SX79 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.1■□□□□ 0.17
Shroom1Q5SX79 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shroom1Q5SX79 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.1■□□□□ 0.17
Shroom1Q5SX79 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shroom1Q5SX79 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shroom1Q5SX79 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shroom1Q5SX79 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shroom1Q5SX79 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shroom1Q5SX79 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.09■□□□□ 0.17
Shroom1Q5SX79 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shroom1Q5SX79 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Shroom1Q5SX79 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Shroom1Q5SX79 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shroom1Q5SX79 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Shroom1Q5SX79 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.09■□□□□ 0.17
Shroom1Q5SX79 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Shroom1Q5SX79 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shroom1Q5SX79 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shroom1Q5SX79 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.09■□□□□ 0.17
Shroom1Q5SX79 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.09■□□□□ 0.17
Shroom1Q5SX79 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Shroom1Q5SX79 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.09■□□□□ 0.17
Shroom1Q5SX79 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shroom1Q5SX79 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Shroom1Q5SX79 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Shroom1Q5SX79 Gm2272-201ENSMUST00000194903 582 ntBASIC16.09■□□□□ 0.17
Shroom1Q5SX79 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shroom1Q5SX79 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.09■□□□□ 0.17
Shroom1Q5SX79 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shroom1Q5SX79 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Shroom1Q5SX79 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shroom1Q5SX79 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.09■□□□□ 0.17
Shroom1Q5SX79 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shroom1Q5SX79 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Shroom1Q5SX79 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Shroom1Q5SX79 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Shroom1Q5SX79 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Shroom1Q5SX79 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shroom1Q5SX79 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shroom1Q5SX79 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Shroom1Q5SX79 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Shroom1Q5SX79 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Shroom1Q5SX79 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Shroom1Q5SX79 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Shroom1Q5SX79 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.08■□□□□ 0.16
Shroom1Q5SX79 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Shroom1Q5SX79 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Shroom1Q5SX79 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Shroom1Q5SX79 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC16.08■□□□□ 0.16
Shroom1Q5SX79 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.08■□□□□ 0.16
Shroom1Q5SX79 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.08■□□□□ 0.16
Shroom1Q5SX79 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Shroom1Q5SX79 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Shroom1Q5SX79 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms