Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC10.23□□□□□ -0.77
Trav3-1Q5R1I8 Gm22325-201ENSMUST00000158904 308 ntBASIC10.23□□□□□ -0.77
Trav3-1Q5R1I8 Gm5067-201ENSMUST00000170449 1009 ntBASIC10.23□□□□□ -0.77
Trav3-1Q5R1I8 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Trav3-1Q5R1I8 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-1Q5R1I8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-1Q5R1I8 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-1Q5R1I8 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-1Q5R1I8 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-1Q5R1I8 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-1Q5R1I8 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-1Q5R1I8 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav3-1Q5R1I8 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav3-1Q5R1I8 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-1Q5R1I8 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Trav3-1Q5R1I8 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav3-1Q5R1I8 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-1Q5R1I8 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav3-1Q5R1I8 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-1Q5R1I8 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-1Q5R1I8 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav3-1Q5R1I8 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-1Q5R1I8 Gm18263-201ENSMUST00000220846 1928 ntBASIC10.23□□□□□ -0.77
Trav3-1Q5R1I8 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-1Q5R1I8 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-1Q5R1I8 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-1Q5R1I8 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-1Q5R1I8 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Trav3-1Q5R1I8 Gm11405-201ENSMUST00000118689 1556 ntBASIC10.22□□□□□ -0.77
Trav3-1Q5R1I8 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-1Q5R1I8 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-1Q5R1I8 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-1Q5R1I8 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-1Q5R1I8 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Trav3-1Q5R1I8 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-1Q5R1I8 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-1Q5R1I8 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-1Q5R1I8 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC10.22□□□□□ -0.77
Trav3-1Q5R1I8 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-1Q5R1I8 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Trav3-1Q5R1I8 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-1Q5R1I8 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC10.22□□□□□ -0.77
Trav3-1Q5R1I8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-1Q5R1I8 AC160393.1-201ENSMUST00000218378 1279 ntBASIC10.22□□□□□ -0.77
Trav3-1Q5R1I8 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-1Q5R1I8 AL590614.2-201ENSMUST00000225374 1937 ntBASIC10.22□□□□□ -0.77
Trav3-1Q5R1I8 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-1Q5R1I8 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-1Q5R1I8 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-1Q5R1I8 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-1Q5R1I8 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-1Q5R1I8 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Trav3-1Q5R1I8 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-1Q5R1I8 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-1Q5R1I8 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-1Q5R1I8 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Trav3-1Q5R1I8 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-1Q5R1I8 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-1Q5R1I8 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-1Q5R1I8 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-1Q5R1I8 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-1Q5R1I8 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-1Q5R1I8 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-1Q5R1I8 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3-1Q5R1I8 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.22□□□□□ -0.77
Trav3-1Q5R1I8 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC10.21□□□□□ -0.77
Trav3-1Q5R1I8 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.21□□□□□ -0.77
Trav3-1Q5R1I8 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-1Q5R1I8 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Trav3-1Q5R1I8 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-1Q5R1I8 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC10.21□□□□□ -0.77
Trav3-1Q5R1I8 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-1Q5R1I8 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-1Q5R1I8 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-1Q5R1I8 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC10.21□□□□□ -0.77
Trav3-1Q5R1I8 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-1Q5R1I8 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-1Q5R1I8 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-1Q5R1I8 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-1Q5R1I8 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Trav3-1Q5R1I8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-1Q5R1I8 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav3-1Q5R1I8 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
Trav3-1Q5R1I8 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3-1Q5R1I8 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC10.21□□□□□ -0.78
Trav3-1Q5R1I8 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3-1Q5R1I8 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3-1Q5R1I8 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Trav3-1Q5R1I8 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3-1Q5R1I8 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Trav3-1Q5R1I8 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC10.21□□□□□ -0.78
Trav3-1Q5R1I8 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Trav3-1Q5R1I8 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC10.21□□□□□ -0.78
Trav3-1Q5R1I8 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3-1Q5R1I8 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3-1Q5R1I8 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC10.21□□□□□ -0.78
Trav3-1Q5R1I8 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3-1Q5R1I8 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC10.21□□□□□ -0.78
Trav3-1Q5R1I8 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav3-1Q5R1I8 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms