Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6-2Q5R1I4 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6-2Q5R1I4 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.28
Trav6-2Q5R1I4 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6-2Q5R1I4 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6-2Q5R1I4 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6-2Q5R1I4 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.27□□□□□ -0.29
Trav6-2Q5R1I4 Gm2810-201ENSMUST00000118681 990 ntBASIC13.27□□□□□ -0.29
Trav6-2Q5R1I4 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav6-2Q5R1I4 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.27□□□□□ -0.29
Trav6-2Q5R1I4 Gm27321-201ENSMUST00000185021 205 ntBASIC13.27□□□□□ -0.29
Trav6-2Q5R1I4 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-2Q5R1I4 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-2Q5R1I4 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-2Q5R1I4 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.27□□□□□ -0.29
Trav6-2Q5R1I4 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.27□□□□□ -0.29
Trav6-2Q5R1I4 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-2Q5R1I4 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-2Q5R1I4 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-2Q5R1I4 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-2Q5R1I4 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-2Q5R1I4 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-2Q5R1I4 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-2Q5R1I4 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-2Q5R1I4 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-2Q5R1I4 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-2Q5R1I4 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-2Q5R1I4 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav6-2Q5R1I4 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Trav6-2Q5R1I4 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-2Q5R1I4 Gm19439-201ENSMUST00000198195 2273 ntBASIC13.27□□□□□ -0.29
Trav6-2Q5R1I4 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-2Q5R1I4 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-2Q5R1I4 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-2Q5R1I4 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav6-2Q5R1I4 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav6-2Q5R1I4 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-2Q5R1I4 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav6-2Q5R1I4 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-2Q5R1I4 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav6-2Q5R1I4 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-2Q5R1I4 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav6-2Q5R1I4 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-2Q5R1I4 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav6-2Q5R1I4 Gm27622-201ENSMUST00000183779 60 ntBASIC13.26□□□□□ -0.29
Trav6-2Q5R1I4 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.26□□□□□ -0.29
Trav6-2Q5R1I4 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-2Q5R1I4 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav6-2Q5R1I4 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-2Q5R1I4 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-2Q5R1I4 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav6-2Q5R1I4 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-2Q5R1I4 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.26□□□□□ -0.29
Trav6-2Q5R1I4 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-2Q5R1I4 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-2Q5R1I4 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav6-2Q5R1I4 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-2Q5R1I4 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 Gm9824-201ENSMUST00000178707 561 ntBASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms