Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-2Q5R1I3 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-2Q5R1I3 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-2Q5R1I3 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-2Q5R1I3 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-2Q5R1I3 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-2Q5R1I3 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-2Q5R1I3 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-2Q5R1I3 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav7-2Q5R1I3 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav7-2Q5R1I3 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-2Q5R1I3 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-2Q5R1I3 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-2Q5R1I3 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav7-2Q5R1I3 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-2Q5R1I3 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-2Q5R1I3 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC11.31□□□□□ -0.6
Trav7-2Q5R1I3 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav7-2Q5R1I3 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-2Q5R1I3 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-2Q5R1I3 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-2Q5R1I3 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-2Q5R1I3 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-2Q5R1I3 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-2Q5R1I3 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC11.31□□□□□ -0.6
Trav7-2Q5R1I3 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC11.31□□□□□ -0.6
Trav7-2Q5R1I3 Gm25745-201ENSMUST00000174945 133 ntBASIC11.31□□□□□ -0.6
Trav7-2Q5R1I3 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC11.31□□□□□ -0.6
Trav7-2Q5R1I3 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-2Q5R1I3 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav7-2Q5R1I3 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-2Q5R1I3 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-2Q5R1I3 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.31□□□□□ -0.6
Trav7-2Q5R1I3 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav7-2Q5R1I3 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-2Q5R1I3 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav7-2Q5R1I3 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC11.31□□□□□ -0.6
Trav7-2Q5R1I3 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-2Q5R1I3 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-2Q5R1I3 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-2Q5R1I3 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav7-2Q5R1I3 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-2Q5R1I3 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-2Q5R1I3 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Gm4609-201ENSMUST00000106443 1002 ntBASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Gm5138-201ENSMUST00000113842 1002 ntBASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Gm15191-201ENSMUST00000117933 1000 ntBASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Gm12182-201ENSMUST00000118655 1008 ntBASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Gm13882-201ENSMUST00000120886 1002 ntBASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Gm10284-201ENSMUST00000145057 1005 ntBASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Gm10481-201ENSMUST00000179228 1002 ntBASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Gm2574-201ENSMUST00000181051 1002 ntBASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Gm3200-201ENSMUST00000181493 1002 ntBASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Gm8825-201ENSMUST00000182565 998 ntBASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Gm4518-201ENSMUST00000182638 718 ntBASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Gm8330-201ENSMUST00000182754 1008 ntBASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Gm4575-201ENSMUST00000182991 1002 ntBASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Gm8709-201ENSMUST00000183230 1012 ntBASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Ank2-226ENSMUST00000189368 339 ntBASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Gm10293-201ENSMUST00000076317 1002 ntBASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Gm6316-201ENSMUST00000082064 1020 ntBASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Gm44291-201ENSMUST00000203102 2865 ntBASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav7-2Q5R1I3 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms