Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trav8d-2Q5R1B6 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav8d-2Q5R1B6 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav8d-2Q5R1B6 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav8d-2Q5R1B6 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav8d-2Q5R1B6 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav8d-2Q5R1B6 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trav8d-2Q5R1B6 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.66□□□□□ -0.06
Trav8d-2Q5R1B6 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8d-2Q5R1B6 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trav8d-2Q5R1B6 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trav8d-2Q5R1B6 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav8d-2Q5R1B6 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8d-2Q5R1B6 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8d-2Q5R1B6 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8d-2Q5R1B6 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8d-2Q5R1B6 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8d-2Q5R1B6 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8d-2Q5R1B6 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.66□□□□□ -0.06
Trav8d-2Q5R1B6 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8d-2Q5R1B6 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav8d-2Q5R1B6 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trav8d-2Q5R1B6 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8d-2Q5R1B6 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav8d-2Q5R1B6 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.66□□□□□ -0.06
Trav8d-2Q5R1B6 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC14.66□□□□□ -0.06
Trav8d-2Q5R1B6 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.66□□□□□ -0.06
Trav8d-2Q5R1B6 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.66□□□□□ -0.06
Trav8d-2Q5R1B6 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8d-2Q5R1B6 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8d-2Q5R1B6 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8d-2Q5R1B6 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Trav8d-2Q5R1B6 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8d-2Q5R1B6 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav8d-2Q5R1B6 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8d-2Q5R1B6 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav8d-2Q5R1B6 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8d-2Q5R1B6 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8d-2Q5R1B6 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Trav8d-2Q5R1B6 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8d-2Q5R1B6 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8d-2Q5R1B6 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav8d-2Q5R1B6 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8d-2Q5R1B6 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trav8d-2Q5R1B6 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.65□□□□□ -0.06
Trav8d-2Q5R1B6 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.65□□□□□ -0.06
Trav8d-2Q5R1B6 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.65□□□□□ -0.06
Trav8d-2Q5R1B6 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.65□□□□□ -0.06
Trav8d-2Q5R1B6 Mir1897-201ENSMUST00000122581 272 ntBASIC14.65□□□□□ -0.06
Trav8d-2Q5R1B6 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8d-2Q5R1B6 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8d-2Q5R1B6 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.65□□□□□ -0.06
Trav8d-2Q5R1B6 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8d-2Q5R1B6 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.65□□□□□ -0.06
Trav8d-2Q5R1B6 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8d-2Q5R1B6 Gm46209-201ENSMUST00000217912 553 ntBASIC14.65□□□□□ -0.06
Trav8d-2Q5R1B6 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8d-2Q5R1B6 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8d-2Q5R1B6 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8d-2Q5R1B6 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8d-2Q5R1B6 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8d-2Q5R1B6 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8d-2Q5R1B6 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8d-2Q5R1B6 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.65□□□□□ -0.06
Trav8d-2Q5R1B6 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8d-2Q5R1B6 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8d-2Q5R1B6 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Trav8d-2Q5R1B6 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trav8d-2Q5R1B6 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8d-2Q5R1B6 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Trav8d-2Q5R1B6 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.64□□□□□ -0.07
Trav8d-2Q5R1B6 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8d-2Q5R1B6 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.64□□□□□ -0.07
Trav8d-2Q5R1B6 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8d-2Q5R1B6 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trav8d-2Q5R1B6 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8d-2Q5R1B6 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8d-2Q5R1B6 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8d-2Q5R1B6 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8d-2Q5R1B6 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trav8d-2Q5R1B6 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav8d-2Q5R1B6 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8d-2Q5R1B6 Gm4875-201ENSMUST00000118257 786 ntBASIC14.64□□□□□ -0.07
Trav8d-2Q5R1B6 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.64□□□□□ -0.07
Trav8d-2Q5R1B6 Gm12091-201ENSMUST00000146791 830 ntBASIC14.64□□□□□ -0.07
Trav8d-2Q5R1B6 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav8d-2Q5R1B6 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8d-2Q5R1B6 Gm3436-201ENSMUST00000179930 840 ntBASIC14.64□□□□□ -0.07
Trav8d-2Q5R1B6 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav8d-2Q5R1B6 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav8d-2Q5R1B6 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.64□□□□□ -0.07
Trav8d-2Q5R1B6 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8d-2Q5R1B6 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8d-2Q5R1B6 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8d-2Q5R1B6 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8d-2Q5R1B6 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8d-2Q5R1B6 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8d-2Q5R1B6 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8d-2Q5R1B6 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav8d-2Q5R1B6 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms