Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.82□□□□□ -0.04
Vps13aQ5H8C4 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps13aQ5H8C4 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.82□□□□□ -0.04
Vps13aQ5H8C4 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps13aQ5H8C4 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps13aQ5H8C4 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps13aQ5H8C4 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps13aQ5H8C4 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vps13aQ5H8C4 Snora78-201ENSMUST00000158630 128 ntBASIC14.82□□□□□ -0.04
Vps13aQ5H8C4 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.82□□□□□ -0.04
Vps13aQ5H8C4 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps13aQ5H8C4 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps13aQ5H8C4 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Vps13aQ5H8C4 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Vps13aQ5H8C4 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.81□□□□□ -0.04
Vps13aQ5H8C4 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Vps13aQ5H8C4 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps13aQ5H8C4 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps13aQ5H8C4 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps13aQ5H8C4 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps13aQ5H8C4 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps13aQ5H8C4 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps13aQ5H8C4 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.81□□□□□ -0.04
Vps13aQ5H8C4 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Vps13aQ5H8C4 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps13aQ5H8C4 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps13aQ5H8C4 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps13aQ5H8C4 Gm12390-201ENSMUST00000117897 397 ntBASIC14.81□□□□□ -0.04
Vps13aQ5H8C4 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC14.81□□□□□ -0.04
Vps13aQ5H8C4 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps13aQ5H8C4 Gm27701-201ENSMUST00000184498 110 ntBASIC14.81□□□□□ -0.04
Vps13aQ5H8C4 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vps13aQ5H8C4 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.81□□□□□ -0.04
Vps13aQ5H8C4 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Vps13aQ5H8C4 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Vps13aQ5H8C4 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps13aQ5H8C4 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps13aQ5H8C4 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vps13aQ5H8C4 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps13aQ5H8C4 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps13aQ5H8C4 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Vps13aQ5H8C4 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.8□□□□□ -0.04
Vps13aQ5H8C4 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vps13aQ5H8C4 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Vps13aQ5H8C4 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps13aQ5H8C4 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vps13aQ5H8C4 Gm45784-201ENSMUST00000188360 142 ntBASIC14.8□□□□□ -0.04
Vps13aQ5H8C4 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps13aQ5H8C4 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps13aQ5H8C4 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Vps13aQ5H8C4 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps13aQ5H8C4 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps13aQ5H8C4 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps13aQ5H8C4 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Vps13aQ5H8C4 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps13aQ5H8C4 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vps13aQ5H8C4 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps13aQ5H8C4 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps13aQ5H8C4 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps13aQ5H8C4 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Vps13aQ5H8C4 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vps13aQ5H8C4 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vps13aQ5H8C4 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps13aQ5H8C4 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps13aQ5H8C4 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Vps13aQ5H8C4 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps13aQ5H8C4 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.79□□□□□ -0.04
Vps13aQ5H8C4 Mir6392-201ENSMUST00000184924 108 ntBASIC14.79□□□□□ -0.04
Vps13aQ5H8C4 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.79□□□□□ -0.04
Vps13aQ5H8C4 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.79□□□□□ -0.04
Vps13aQ5H8C4 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps13aQ5H8C4 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps13aQ5H8C4 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vps13aQ5H8C4 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps13aQ5H8C4 Gm4984-201ENSMUST00000115987 360 ntBASIC14.79□□□□□ -0.04
Vps13aQ5H8C4 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.79□□□□□ -0.04
Vps13aQ5H8C4 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Vps13aQ5H8C4 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vps13aQ5H8C4 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps13aQ5H8C4 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps13aQ5H8C4 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.78□□□□□ -0.04
Vps13aQ5H8C4 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps13aQ5H8C4 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps13aQ5H8C4 Gm5187-201ENSMUST00000117317 991 ntBASIC14.78□□□□□ -0.04
Vps13aQ5H8C4 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vps13aQ5H8C4 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps13aQ5H8C4 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Vps13aQ5H8C4 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps13aQ5H8C4 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps13aQ5H8C4 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vps13aQ5H8C4 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Vps13aQ5H8C4 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps13aQ5H8C4 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps13aQ5H8C4 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vps13aQ5H8C4 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.78□□□□□ -0.04
Vps13aQ5H8C4 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps13aQ5H8C4 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Vps13aQ5H8C4 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Vps13aQ5H8C4 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps13aQ5H8C4 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms