Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf20Q5DTM8 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf20Q5DTM8 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.04■□□□□ 0.48
Rnf20Q5DTM8 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.04■□□□□ 0.48
Rnf20Q5DTM8 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
Rnf20Q5DTM8 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf20Q5DTM8 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf20Q5DTM8 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf20Q5DTM8 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf20Q5DTM8 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf20Q5DTM8 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf20Q5DTM8 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC18.04■□□□□ 0.48
Rnf20Q5DTM8 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Rnf20Q5DTM8 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf20Q5DTM8 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf20Q5DTM8 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf20Q5DTM8 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf20Q5DTM8 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf20Q5DTM8 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf20Q5DTM8 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf20Q5DTM8 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf20Q5DTM8 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf20Q5DTM8 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf20Q5DTM8 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Rnf20Q5DTM8 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf20Q5DTM8 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf20Q5DTM8 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf20Q5DTM8 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf20Q5DTM8 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf20Q5DTM8 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf20Q5DTM8 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf20Q5DTM8 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf20Q5DTM8 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf20Q5DTM8 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf20Q5DTM8 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf20Q5DTM8 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf20Q5DTM8 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf20Q5DTM8 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC18.03■□□□□ 0.48
Rnf20Q5DTM8 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf20Q5DTM8 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC18.02■□□□□ 0.48
Rnf20Q5DTM8 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf20Q5DTM8 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf20Q5DTM8 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf20Q5DTM8 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf20Q5DTM8 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Rnf20Q5DTM8 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.02■□□□□ 0.48
Rnf20Q5DTM8 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf20Q5DTM8 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.48
Rnf20Q5DTM8 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.02■□□□□ 0.48
Rnf20Q5DTM8 Gm45605-201ENSMUST00000210265 4269 ntBASIC18.02■□□□□ 0.48
Rnf20Q5DTM8 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.02■□□□□ 0.48
Rnf20Q5DTM8 Gm5184-201ENSMUST00000220417 1702 ntBASIC18.02■□□□□ 0.48
Rnf20Q5DTM8 AV026068-213ENSMUST00000223675 1171 ntBASIC18.02■□□□□ 0.48
Rnf20Q5DTM8 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Rnf20Q5DTM8 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf20Q5DTM8 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf20Q5DTM8 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rnf20Q5DTM8 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rnf20Q5DTM8 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rnf20Q5DTM8 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf20Q5DTM8 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Rnf20Q5DTM8 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf20Q5DTM8 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf20Q5DTM8 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
Rnf20Q5DTM8 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf20Q5DTM8 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf20Q5DTM8 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.01■□□□□ 0.47
Rnf20Q5DTM8 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Rnf20Q5DTM8 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf20Q5DTM8 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Rnf20Q5DTM8 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf20Q5DTM8 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf20Q5DTM8 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf20Q5DTM8 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf20Q5DTM8 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf20Q5DTM8 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf20Q5DTM8 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Rnf20Q5DTM8 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC18.01■□□□□ 0.47
Rnf20Q5DTM8 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Rnf20Q5DTM8 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Rnf20Q5DTM8 AC174678.1-201ENSMUST00000228007 2749 ntBASIC18■□□□□ 0.47
Rnf20Q5DTM8 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf20Q5DTM8 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rnf20Q5DTM8 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
Rnf20Q5DTM8 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
Rnf20Q5DTM8 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf20Q5DTM8 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf20Q5DTM8 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rnf20Q5DTM8 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC18■□□□□ 0.47
Rnf20Q5DTM8 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf20Q5DTM8 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC18■□□□□ 0.47
Rnf20Q5DTM8 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf20Q5DTM8 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf20Q5DTM8 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf20Q5DTM8 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rnf20Q5DTM8 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf20Q5DTM8 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rnf20Q5DTM8 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18■□□□□ 0.47
Rnf20Q5DTM8 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rnf20Q5DTM8 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms