Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Rc3h1Q4VGL6 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Rc3h1Q4VGL6 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Rc3h1Q4VGL6 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.45■□□□□ 0.38
Rc3h1Q4VGL6 Gm42790-201ENSMUST00000201268 969 ntBASIC17.45■□□□□ 0.38
Rc3h1Q4VGL6 Gm43125-201ENSMUST00000201724 730 ntBASIC17.45■□□□□ 0.38
Rc3h1Q4VGL6 Gm5312-201ENSMUST00000203728 547 ntBASIC17.45■□□□□ 0.38
Rc3h1Q4VGL6 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.45■□□□□ 0.38
Rc3h1Q4VGL6 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Rc3h1Q4VGL6 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rc3h1Q4VGL6 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Rc3h1Q4VGL6 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rc3h1Q4VGL6 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rc3h1Q4VGL6 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.45■□□□□ 0.38
Rc3h1Q4VGL6 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rc3h1Q4VGL6 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rc3h1Q4VGL6 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rc3h1Q4VGL6 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rc3h1Q4VGL6 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rc3h1Q4VGL6 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Rc3h1Q4VGL6 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rc3h1Q4VGL6 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rc3h1Q4VGL6 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rc3h1Q4VGL6 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rc3h1Q4VGL6 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rc3h1Q4VGL6 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Rc3h1Q4VGL6 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rc3h1Q4VGL6 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.44■□□□□ 0.38
Rc3h1Q4VGL6 Gm6973-201ENSMUST00000117080 721 ntBASIC17.44■□□□□ 0.38
Rc3h1Q4VGL6 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.44■□□□□ 0.38
Rc3h1Q4VGL6 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.44■□□□□ 0.38
Rc3h1Q4VGL6 Gm15483-201ENSMUST00000120338 456 ntBASIC17.44■□□□□ 0.38
Rc3h1Q4VGL6 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rc3h1Q4VGL6 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Rc3h1Q4VGL6 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC17.44■□□□□ 0.38
Rc3h1Q4VGL6 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.44■□□□□ 0.38
Rc3h1Q4VGL6 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.44■□□□□ 0.38
Rc3h1Q4VGL6 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rc3h1Q4VGL6 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.44■□□□□ 0.38
Rc3h1Q4VGL6 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Rc3h1Q4VGL6 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rc3h1Q4VGL6 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.44■□□□□ 0.38
Rc3h1Q4VGL6 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rc3h1Q4VGL6 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Rc3h1Q4VGL6 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Rc3h1Q4VGL6 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rc3h1Q4VGL6 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rc3h1Q4VGL6 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rc3h1Q4VGL6 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.44■□□□□ 0.38
Rc3h1Q4VGL6 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rc3h1Q4VGL6 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.44■□□□□ 0.38
Rc3h1Q4VGL6 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rc3h1Q4VGL6 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rc3h1Q4VGL6 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rc3h1Q4VGL6 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rc3h1Q4VGL6 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rc3h1Q4VGL6 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.43■□□□□ 0.38
Rc3h1Q4VGL6 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rc3h1Q4VGL6 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Rc3h1Q4VGL6 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rc3h1Q4VGL6 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.43■□□□□ 0.38
Rc3h1Q4VGL6 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rc3h1Q4VGL6 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.43■□□□□ 0.38
Rc3h1Q4VGL6 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Rc3h1Q4VGL6 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Rc3h1Q4VGL6 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rc3h1Q4VGL6 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.43■□□□□ 0.38
Rc3h1Q4VGL6 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.43■□□□□ 0.38
Rc3h1Q4VGL6 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rc3h1Q4VGL6 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rc3h1Q4VGL6 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rc3h1Q4VGL6 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rc3h1Q4VGL6 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rc3h1Q4VGL6 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rc3h1Q4VGL6 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rc3h1Q4VGL6 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rc3h1Q4VGL6 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rc3h1Q4VGL6 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Rc3h1Q4VGL6 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rc3h1Q4VGL6 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Rc3h1Q4VGL6 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rc3h1Q4VGL6 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rc3h1Q4VGL6 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rc3h1Q4VGL6 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.42■□□□□ 0.38
Rc3h1Q4VGL6 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rc3h1Q4VGL6 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.42■□□□□ 0.38
Rc3h1Q4VGL6 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rc3h1Q4VGL6 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.42■□□□□ 0.38
Rc3h1Q4VGL6 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.42■□□□□ 0.38
Rc3h1Q4VGL6 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rc3h1Q4VGL6 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rc3h1Q4VGL6 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rc3h1Q4VGL6 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rc3h1Q4VGL6 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rc3h1Q4VGL6 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rc3h1Q4VGL6 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rc3h1Q4VGL6 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rc3h1Q4VGL6 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rc3h1Q4VGL6 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.41■□□□□ 0.38
Rc3h1Q4VGL6 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms