Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC8.83□□□□□ -1
Herc2Q4U2R1 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Herc2Q4U2R1 Gm5763-201ENSMUST00000155951 1530 ntBASIC8.83□□□□□ -1
Herc2Q4U2R1 Gm45751-201ENSMUST00000210185 1573 ntBASIC8.83□□□□□ -1
Herc2Q4U2R1 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC8.83□□□□□ -1
Herc2Q4U2R1 AC131743.5-201ENSMUST00000220775 1618 ntBASIC8.83□□□□□ -1
Herc2Q4U2R1 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Herc2Q4U2R1 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Herc2Q4U2R1 Gm14381-201ENSMUST00000122105 414 ntBASIC8.83□□□□□ -1
Herc2Q4U2R1 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC8.83□□□□□ -1
Herc2Q4U2R1 Gm3508-201ENSMUST00000186012 792 ntBASIC8.83□□□□□ -1
Herc2Q4U2R1 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
Herc2Q4U2R1 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC8.83□□□□□ -1
Herc2Q4U2R1 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Herc2Q4U2R1 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Herc2Q4U2R1 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Herc2Q4U2R1 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Herc2Q4U2R1 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC8.83□□□□□ -1
Herc2Q4U2R1 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Herc2Q4U2R1 Gm12566-201ENSMUST00000121479 359 ntBASIC8.83□□□□□ -1
Herc2Q4U2R1 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Herc2Q4U2R1 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Herc2Q4U2R1 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Herc2Q4U2R1 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Herc2Q4U2R1 Zcchc6-207ENSMUST00000225576 2499 ntBASIC8.82□□□□□ -1
Herc2Q4U2R1 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Herc2Q4U2R1 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Herc2Q4U2R1 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Herc2Q4U2R1 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Herc2Q4U2R1 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Herc2Q4U2R1 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC8.82□□□□□ -1
Herc2Q4U2R1 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Herc2Q4U2R1 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Herc2Q4U2R1 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Herc2Q4U2R1 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Herc2Q4U2R1 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Herc2Q4U2R1 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC8.82□□□□□ -1
Herc2Q4U2R1 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Herc2Q4U2R1 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC8.82□□□□□ -1
Herc2Q4U2R1 Trav13-3-201ENSMUST00000117226 336 ntBASIC8.82□□□□□ -1
Herc2Q4U2R1 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC8.82□□□□□ -1
Herc2Q4U2R1 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC8.82□□□□□ -1
Herc2Q4U2R1 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Herc2Q4U2R1 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Herc2Q4U2R1 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Herc2Q4U2R1 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Herc2Q4U2R1 AC166574.6-201ENSMUST00000227889 1806 ntBASIC8.82□□□□□ -1
Herc2Q4U2R1 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC8.82□□□□□ -1
Herc2Q4U2R1 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Herc2Q4U2R1 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC8.82□□□□□ -1
Herc2Q4U2R1 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC8.82□□□□□ -1
Herc2Q4U2R1 Gm2383-201ENSMUST00000181461 807 ntBASIC8.82□□□□□ -1
Herc2Q4U2R1 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Herc2Q4U2R1 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Herc2Q4U2R1 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Herc2Q4U2R1 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC8.82□□□□□ -1
Herc2Q4U2R1 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC8.82□□□□□ -1
Herc2Q4U2R1 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Herc2Q4U2R1 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Herc2Q4U2R1 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC8.82□□□□□ -1
Herc2Q4U2R1 Gm2639-201ENSMUST00000156881 1297 ntBASIC8.82□□□□□ -1
Herc2Q4U2R1 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC8.82□□□□□ -1
Herc2Q4U2R1 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC8.82□□□□□ -1
Herc2Q4U2R1 Gm34767-201ENSMUST00000191813 1062 ntBASIC8.82□□□□□ -1
Herc2Q4U2R1 Gm29705-201ENSMUST00000212598 474 ntBASIC8.82□□□□□ -1
Herc2Q4U2R1 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC8.82□□□□□ -1
Herc2Q4U2R1 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC8.81□□□□□ -1
Herc2Q4U2R1 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Herc2Q4U2R1 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Herc2Q4U2R1 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Herc2Q4U2R1 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC8.81□□□□□ -1
Herc2Q4U2R1 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC8.81□□□□□ -1
Herc2Q4U2R1 Gm15429-201ENSMUST00000151268 798 ntBASIC8.81□□□□□ -1
Herc2Q4U2R1 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
Herc2Q4U2R1 Gm43133-201ENSMUST00000197472 463 ntBASIC8.81□□□□□ -1
Herc2Q4U2R1 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Herc2Q4U2R1 AC140406.1-201ENSMUST00000226481 465 ntBASIC8.81□□□□□ -1
Herc2Q4U2R1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Herc2Q4U2R1 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Herc2Q4U2R1 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Herc2Q4U2R1 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Herc2Q4U2R1 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Herc2Q4U2R1 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Herc2Q4U2R1 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Herc2Q4U2R1 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC8.81□□□□□ -1
Herc2Q4U2R1 Mir5120-201ENSMUST00000175020 78 ntBASIC8.81□□□□□ -1
Herc2Q4U2R1 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC8.81□□□□□ -1
Herc2Q4U2R1 Gm6015-201ENSMUST00000217493 1586 ntBASIC8.81□□□□□ -1
Herc2Q4U2R1 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Herc2Q4U2R1 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Herc2Q4U2R1 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC8.81□□□□□ -1
Herc2Q4U2R1 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Herc2Q4U2R1 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC8.81□□□□□ -1
Herc2Q4U2R1 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Herc2Q4U2R1 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC8.81□□□□□ -1
Herc2Q4U2R1 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC8.81□□□□□ -1
Herc2Q4U2R1 Gm44985-201ENSMUST00000206202 1016 ntBASIC8.81□□□□□ -1
Herc2Q4U2R1 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC8.81□□□□□ -1
Herc2Q4U2R1 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Herc2Q4U2R1 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms