Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim80Q3V061 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim80Q3V061 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim80Q3V061 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim80Q3V061 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim80Q3V061 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim80Q3V061 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trim80Q3V061 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trim80Q3V061 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim80Q3V061 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.68■□□□□ 0.1
Trim80Q3V061 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.68■□□□□ 0.1
Trim80Q3V061 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trim80Q3V061 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.68■□□□□ 0.1
Trim80Q3V061 Gm43347-201ENSMUST00000200226 580 ntBASIC15.68■□□□□ 0.1
Trim80Q3V061 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.68■□□□□ 0.1
Trim80Q3V061 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim80Q3V061 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.68■□□□□ 0.1
Trim80Q3V061 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trim80Q3V061 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim80Q3V061 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trim80Q3V061 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim80Q3V061 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim80Q3V061 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim80Q3V061 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim80Q3V061 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim80Q3V061 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.68■□□□□ 0.1
Trim80Q3V061 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trim80Q3V061 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim80Q3V061 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim80Q3V061 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim80Q3V061 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim80Q3V061 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim80Q3V061 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Trim80Q3V061 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trim80Q3V061 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Trim80Q3V061 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.67■□□□□ 0.1
Trim80Q3V061 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trim80Q3V061 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim80Q3V061 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.67■□□□□ 0.1
Trim80Q3V061 Gm12895-201ENSMUST00000122214 226 ntBASIC15.67■□□□□ 0.1
Trim80Q3V061 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.67■□□□□ 0.1
Trim80Q3V061 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.67■□□□□ 0.1
Trim80Q3V061 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.67■□□□□ 0.1
Trim80Q3V061 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trim80Q3V061 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim80Q3V061 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim80Q3V061 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim80Q3V061 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim80Q3V061 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim80Q3V061 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim80Q3V061 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim80Q3V061 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim80Q3V061 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim80Q3V061 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim80Q3V061 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim80Q3V061 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim80Q3V061 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim80Q3V061 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.66■□□□□ 0.1
Trim80Q3V061 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.66■□□□□ 0.1
Trim80Q3V061 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim80Q3V061 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trim80Q3V061 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim80Q3V061 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trim80Q3V061 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim80Q3V061 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim80Q3V061 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trim80Q3V061 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim80Q3V061 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim80Q3V061 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.66■□□□□ 0.1
Trim80Q3V061 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.66■□□□□ 0.1
Trim80Q3V061 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.66■□□□□ 0.1
Trim80Q3V061 Gm5864-201ENSMUST00000202263 970 ntBASIC15.66■□□□□ 0.1
Trim80Q3V061 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim80Q3V061 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim80Q3V061 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim80Q3V061 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trim80Q3V061 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim80Q3V061 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim80Q3V061 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim80Q3V061 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim80Q3V061 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim80Q3V061 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim80Q3V061 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim80Q3V061 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trim80Q3V061 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim80Q3V061 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trim80Q3V061 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim80Q3V061 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim80Q3V061 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim80Q3V061 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim80Q3V061 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim80Q3V061 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim80Q3V061 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim80Q3V061 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim80Q3V061 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trim80Q3V061 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim80Q3V061 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim80Q3V061 Gm13884-201ENSMUST00000118103 829 ntBASIC15.65■□□□□ 0.1
Trim80Q3V061 Gm11336-201ENSMUST00000118168 334 ntBASIC15.65■□□□□ 0.1
Trim80Q3V061 Gm15372-201ENSMUST00000120729 834 ntBASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms