Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sf3b2Q3UJB0 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sf3b2Q3UJB0 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sf3b2Q3UJB0 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sf3b2Q3UJB0 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Sf3b2Q3UJB0 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sf3b2Q3UJB0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Sf3b2Q3UJB0 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Sf3b2Q3UJB0 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sf3b2Q3UJB0 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sf3b2Q3UJB0 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC19.45■□□□□ 0.7
Sf3b2Q3UJB0 Gm16476-201ENSMUST00000221544 139 ntBASIC19.45■□□□□ 0.7
Sf3b2Q3UJB0 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sf3b2Q3UJB0 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sf3b2Q3UJB0 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Sf3b2Q3UJB0 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC19.45■□□□□ 0.7
Sf3b2Q3UJB0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.45■□□□□ 0.7
Sf3b2Q3UJB0 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sf3b2Q3UJB0 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sf3b2Q3UJB0 Gm38327-201ENSMUST00000195852 1755 ntBASIC19.44■□□□□ 0.7
Sf3b2Q3UJB0 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sf3b2Q3UJB0 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sf3b2Q3UJB0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sf3b2Q3UJB0 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Sf3b2Q3UJB0 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sf3b2Q3UJB0 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sf3b2Q3UJB0 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sf3b2Q3UJB0 Mir1982-201ENSMUST00000157368 74 ntBASIC19.44■□□□□ 0.7
Sf3b2Q3UJB0 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Sf3b2Q3UJB0 Dupd1-202ENSMUST00000224735 548 ntBASIC19.44■□□□□ 0.7
Sf3b2Q3UJB0 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sf3b2Q3UJB0 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Sf3b2Q3UJB0 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sf3b2Q3UJB0 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sf3b2Q3UJB0 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sf3b2Q3UJB0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Sf3b2Q3UJB0 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sf3b2Q3UJB0 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Sf3b2Q3UJB0 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sf3b2Q3UJB0 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sf3b2Q3UJB0 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sf3b2Q3UJB0 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC19.43■□□□□ 0.7
Sf3b2Q3UJB0 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC19.43■□□□□ 0.7
Sf3b2Q3UJB0 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
Sf3b2Q3UJB0 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC19.43■□□□□ 0.7
Sf3b2Q3UJB0 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC19.43■□□□□ 0.7
Sf3b2Q3UJB0 AC159006.1-201ENSMUST00000226396 258 ntBASIC19.43■□□□□ 0.7
Sf3b2Q3UJB0 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC19.43■□□□□ 0.7
Sf3b2Q3UJB0 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sf3b2Q3UJB0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sf3b2Q3UJB0 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sf3b2Q3UJB0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Sf3b2Q3UJB0 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sf3b2Q3UJB0 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sf3b2Q3UJB0 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Sf3b2Q3UJB0 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Sf3b2Q3UJB0 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Sf3b2Q3UJB0 AC131068.2-201ENSMUST00000226175 1453 ntBASIC19.42■□□□□ 0.7
Sf3b2Q3UJB0 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sf3b2Q3UJB0 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Sf3b2Q3UJB0 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC19.42■□□□□ 0.7
Sf3b2Q3UJB0 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sf3b2Q3UJB0 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sf3b2Q3UJB0 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Sf3b2Q3UJB0 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC19.42■□□□□ 0.7
Sf3b2Q3UJB0 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sf3b2Q3UJB0 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Sf3b2Q3UJB0 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Sf3b2Q3UJB0 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Sf3b2Q3UJB0 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sf3b2Q3UJB0 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sf3b2Q3UJB0 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sf3b2Q3UJB0 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sf3b2Q3UJB0 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sf3b2Q3UJB0 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sf3b2Q3UJB0 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC19.42■□□□□ 0.7
Sf3b2Q3UJB0 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sf3b2Q3UJB0 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sf3b2Q3UJB0 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sf3b2Q3UJB0 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sf3b2Q3UJB0 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sf3b2Q3UJB0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sf3b2Q3UJB0 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC19.41■□□□□ 0.7
Sf3b2Q3UJB0 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC19.41■□□□□ 0.7
Sf3b2Q3UJB0 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Sf3b2Q3UJB0 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC19.41■□□□□ 0.7
Sf3b2Q3UJB0 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sf3b2Q3UJB0 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sf3b2Q3UJB0 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sf3b2Q3UJB0 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sf3b2Q3UJB0 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sf3b2Q3UJB0 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sf3b2Q3UJB0 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC19.4■□□□□ 0.7
Sf3b2Q3UJB0 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Sf3b2Q3UJB0 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.4■□□□□ 0.7
Sf3b2Q3UJB0 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3b2Q3UJB0 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3b2Q3UJB0 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3b2Q3UJB0 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3b2Q3UJB0 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms