Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Snx27Q3UHD6 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Snx27Q3UHD6 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Snx27Q3UHD6 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Snx27Q3UHD6 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Snx27Q3UHD6 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Snx27Q3UHD6 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Snx27Q3UHD6 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Snx27Q3UHD6 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.31■□□□□ 0.2
Snx27Q3UHD6 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Snx27Q3UHD6 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.31■□□□□ 0.2
Snx27Q3UHD6 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.31■□□□□ 0.2
Snx27Q3UHD6 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Snx27Q3UHD6 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Snx27Q3UHD6 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Snx27Q3UHD6 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Snx27Q3UHD6 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Snx27Q3UHD6 Gm25287-201ENSMUST00000103846 110 ntBASIC16.31■□□□□ 0.2
Snx27Q3UHD6 Gm22918-201ENSMUST00000103855 110 ntBASIC16.31■□□□□ 0.2
Snx27Q3UHD6 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.31■□□□□ 0.2
Snx27Q3UHD6 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.31■□□□□ 0.2
Snx27Q3UHD6 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Snx27Q3UHD6 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.31■□□□□ 0.2
Snx27Q3UHD6 Auts2-212ENSMUST00000178555 309 ntBASIC16.31■□□□□ 0.2
Snx27Q3UHD6 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.31■□□□□ 0.2
Snx27Q3UHD6 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC16.31■□□□□ 0.2
Snx27Q3UHD6 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Snx27Q3UHD6 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Snx27Q3UHD6 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Snx27Q3UHD6 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Snx27Q3UHD6 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Snx27Q3UHD6 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.31■□□□□ 0.2
Snx27Q3UHD6 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.31■□□□□ 0.2
Snx27Q3UHD6 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Snx27Q3UHD6 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Snx27Q3UHD6 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Snx27Q3UHD6 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Snx27Q3UHD6 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Snx27Q3UHD6 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Snx27Q3UHD6 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.3■□□□□ 0.2
Snx27Q3UHD6 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.3■□□□□ 0.2
Snx27Q3UHD6 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.3■□□□□ 0.2
Snx27Q3UHD6 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.3■□□□□ 0.2
Snx27Q3UHD6 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Snx27Q3UHD6 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Snx27Q3UHD6 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Snx27Q3UHD6 Mir449b-201ENSMUST00000104833 80 ntBASIC16.3■□□□□ 0.2
Snx27Q3UHD6 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Snx27Q3UHD6 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Snx27Q3UHD6 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Snx27Q3UHD6 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Snx27Q3UHD6 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC16.3■□□□□ 0.2
Snx27Q3UHD6 Gm25948-201ENSMUST00000175334 112 ntBASIC16.3■□□□□ 0.2
Snx27Q3UHD6 Mir6956-201ENSMUST00000183598 62 ntBASIC16.3■□□□□ 0.2
Snx27Q3UHD6 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.3■□□□□ 0.2
Snx27Q3UHD6 AC131710.1-201ENSMUST00000228336 990 ntBASIC16.3■□□□□ 0.2
Snx27Q3UHD6 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Snx27Q3UHD6 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Snx27Q3UHD6 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Snx27Q3UHD6 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Snx27Q3UHD6 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Snx27Q3UHD6 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Snx27Q3UHD6 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Snx27Q3UHD6 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Snx27Q3UHD6 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.3■□□□□ 0.2
Snx27Q3UHD6 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Snx27Q3UHD6 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Snx27Q3UHD6 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Snx27Q3UHD6 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Snx27Q3UHD6 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Snx27Q3UHD6 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Snx27Q3UHD6 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Snx27Q3UHD6 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Snx27Q3UHD6 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Snx27Q3UHD6 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Snx27Q3UHD6 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Snx27Q3UHD6 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Snx27Q3UHD6 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Snx27Q3UHD6 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Snx27Q3UHD6 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.29■□□□□ 0.2
Snx27Q3UHD6 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Snx27Q3UHD6 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Snx27Q3UHD6 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Snx27Q3UHD6 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Snx27Q3UHD6 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.29■□□□□ 0.2
Snx27Q3UHD6 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC16.29■□□□□ 0.2
Snx27Q3UHD6 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Snx27Q3UHD6 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Snx27Q3UHD6 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.29■□□□□ 0.2
Snx27Q3UHD6 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Snx27Q3UHD6 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Snx27Q3UHD6 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC16.29■□□□□ 0.2
Snx27Q3UHD6 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Snx27Q3UHD6 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Snx27Q3UHD6 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Snx27Q3UHD6 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Snx27Q3UHD6 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms