Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Col5a2Q3U962 Gm11918-201ENSMUST00000121660 179 ntBASIC17.78■□□□□ 0.44
Col5a2Q3U962 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.78■□□□□ 0.44
Col5a2Q3U962 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col5a2Q3U962 AC159006.1-201ENSMUST00000226396 258 ntBASIC17.78■□□□□ 0.44
Col5a2Q3U962 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col5a2Q3U962 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC17.78■□□□□ 0.44
Col5a2Q3U962 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Col5a2Q3U962 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Col5a2Q3U962 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col5a2Q3U962 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col5a2Q3U962 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col5a2Q3U962 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.78■□□□□ 0.44
Col5a2Q3U962 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col5a2Q3U962 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col5a2Q3U962 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col5a2Q3U962 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col5a2Q3U962 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Col5a2Q3U962 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col5a2Q3U962 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC17.78■□□□□ 0.44
Col5a2Q3U962 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.77■□□□□ 0.44
Col5a2Q3U962 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Col5a2Q3U962 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Col5a2Q3U962 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col5a2Q3U962 Gm31326-201ENSMUST00000191856 1048 ntBASIC17.77■□□□□ 0.44
Col5a2Q3U962 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Col5a2Q3U962 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC17.77■□□□□ 0.44
Col5a2Q3U962 Gm7390-201ENSMUST00000212452 1216 ntBASIC17.77■□□□□ 0.44
Col5a2Q3U962 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC17.77■□□□□ 0.44
Col5a2Q3U962 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col5a2Q3U962 Gm9229-201ENSMUST00000222777 126 ntBASIC17.77■□□□□ 0.44
Col5a2Q3U962 Gm9797-201ENSMUST00000052902 613 ntBASIC17.77■□□□□ 0.44
Col5a2Q3U962 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col5a2Q3U962 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col5a2Q3U962 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col5a2Q3U962 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Col5a2Q3U962 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col5a2Q3U962 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col5a2Q3U962 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col5a2Q3U962 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.77■□□□□ 0.44
Col5a2Q3U962 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Col5a2Q3U962 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col5a2Q3U962 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col5a2Q3U962 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col5a2Q3U962 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col5a2Q3U962 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col5a2Q3U962 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.77■□□□□ 0.43
Col5a2Q3U962 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col5a2Q3U962 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col5a2Q3U962 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col5a2Q3U962 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC17.76■□□□□ 0.43
Col5a2Q3U962 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col5a2Q3U962 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC17.76■□□□□ 0.43
Col5a2Q3U962 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col5a2Q3U962 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col5a2Q3U962 Gm28760-201ENSMUST00000185995 736 ntBASIC17.76■□□□□ 0.43
Col5a2Q3U962 Gm45453-201ENSMUST00000211758 853 ntBASIC17.76■□□□□ 0.43
Col5a2Q3U962 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col5a2Q3U962 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col5a2Q3U962 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col5a2Q3U962 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col5a2Q3U962 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col5a2Q3U962 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col5a2Q3U962 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Col5a2Q3U962 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col5a2Q3U962 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col5a2Q3U962 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col5a2Q3U962 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Col5a2Q3U962 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col5a2Q3U962 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Col5a2Q3U962 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col5a2Q3U962 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col5a2Q3U962 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col5a2Q3U962 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col5a2Q3U962 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC17.75■□□□□ 0.43
Col5a2Q3U962 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col5a2Q3U962 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col5a2Q3U962 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col5a2Q3U962 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.75■□□□□ 0.43
Col5a2Q3U962 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col5a2Q3U962 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col5a2Q3U962 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Col5a2Q3U962 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col5a2Q3U962 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col5a2Q3U962 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col5a2Q3U962 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col5a2Q3U962 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col5a2Q3U962 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Col5a2Q3U962 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.75■□□□□ 0.43
Col5a2Q3U962 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col5a2Q3U962 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Col5a2Q3U962 Gm15824-201ENSMUST00000119516 955 ntBASIC17.75■□□□□ 0.43
Col5a2Q3U962 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC17.75■□□□□ 0.43
Col5a2Q3U962 Gm9002-201ENSMUST00000178437 499 ntBASIC17.75■□□□□ 0.43
Col5a2Q3U962 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col5a2Q3U962 AC149588.3-201ENSMUST00000227515 150 ntBASIC17.75■□□□□ 0.43
Col5a2Q3U962 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.75■□□□□ 0.43
Col5a2Q3U962 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.75■□□□□ 0.43
Col5a2Q3U962 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col5a2Q3U962 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms