Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf180Q3U827 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf180Q3U827 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf180Q3U827 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Rnf180Q3U827 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf180Q3U827 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf180Q3U827 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf180Q3U827 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf180Q3U827 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC17.61■□□□□ 0.41
Rnf180Q3U827 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf180Q3U827 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC17.61■□□□□ 0.41
Rnf180Q3U827 Gm43818-201ENSMUST00000200605 466 ntBASIC17.61■□□□□ 0.41
Rnf180Q3U827 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf180Q3U827 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf180Q3U827 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf180Q3U827 Gm9823-201ENSMUST00000051212 327 ntBASIC17.61■□□□□ 0.41
Rnf180Q3U827 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf180Q3U827 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf180Q3U827 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf180Q3U827 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf180Q3U827 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Rnf180Q3U827 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf180Q3U827 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf180Q3U827 Gm43289-201ENSMUST00000200537 1475 ntBASIC17.61■□□□□ 0.41
Rnf180Q3U827 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf180Q3U827 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf180Q3U827 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.6■□□□□ 0.41
Rnf180Q3U827 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rnf180Q3U827 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rnf180Q3U827 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC17.6■□□□□ 0.41
Rnf180Q3U827 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf180Q3U827 Gm19184-201ENSMUST00000196798 928 ntBASIC17.6■□□□□ 0.41
Rnf180Q3U827 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf180Q3U827 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf180Q3U827 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC17.6■□□□□ 0.41
Rnf180Q3U827 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf180Q3U827 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf180Q3U827 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf180Q3U827 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf180Q3U827 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf180Q3U827 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rnf180Q3U827 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.59■□□□□ 0.41
Rnf180Q3U827 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf180Q3U827 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf180Q3U827 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Rnf180Q3U827 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Rnf180Q3U827 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf180Q3U827 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC17.59■□□□□ 0.41
Rnf180Q3U827 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.59■□□□□ 0.41
Rnf180Q3U827 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC17.59■□□□□ 0.41
Rnf180Q3U827 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC17.59■□□□□ 0.41
Rnf180Q3U827 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf180Q3U827 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf180Q3U827 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC17.59■□□□□ 0.41
Rnf180Q3U827 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf180Q3U827 Gm19309-201ENSMUST00000218295 205 ntBASIC17.59■□□□□ 0.41
Rnf180Q3U827 Gm45930-201ENSMUST00000221330 292 ntBASIC17.59■□□□□ 0.41
Rnf180Q3U827 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf180Q3U827 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Rnf180Q3U827 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf180Q3U827 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf180Q3U827 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf180Q3U827 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf180Q3U827 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf180Q3U827 AL645783.1-201ENSMUST00000221416 1832 ntBASIC17.58■□□□□ 0.41
Rnf180Q3U827 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rnf180Q3U827 Gm14452-201ENSMUST00000118680 1632 ntBASIC17.58■□□□□ 0.41
Rnf180Q3U827 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Rnf180Q3U827 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.58■□□□□ 0.41
Rnf180Q3U827 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Rnf180Q3U827 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf180Q3U827 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Rnf180Q3U827 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC17.58■□□□□ 0.4
Rnf180Q3U827 Gm2639-201ENSMUST00000156881 1297 ntBASIC17.58■□□□□ 0.4
Rnf180Q3U827 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC17.58■□□□□ 0.4
Rnf180Q3U827 Gm33320-201ENSMUST00000192232 530 ntBASIC17.58■□□□□ 0.4
Rnf180Q3U827 Gm38000-201ENSMUST00000192390 1215 ntBASIC17.58■□□□□ 0.4
Rnf180Q3U827 Gm43830-201ENSMUST00000198760 1067 ntBASIC17.58■□□□□ 0.4
Rnf180Q3U827 Gm43758-201ENSMUST00000199500 367 ntBASIC17.58■□□□□ 0.4
Rnf180Q3U827 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Rnf180Q3U827 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf180Q3U827 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf180Q3U827 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf180Q3U827 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf180Q3U827 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf180Q3U827 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf180Q3U827 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf180Q3U827 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf180Q3U827 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf180Q3U827 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf180Q3U827 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf180Q3U827 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC17.57■□□□□ 0.4
Rnf180Q3U827 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf180Q3U827 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf180Q3U827 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf180Q3U827 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Rnf180Q3U827 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC17.57■□□□□ 0.4
Rnf180Q3U827 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.57■□□□□ 0.4
Rnf180Q3U827 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf180Q3U827 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms