Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fndc4Q3TR08 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Fndc4Q3TR08 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fndc4Q3TR08 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fndc4Q3TR08 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fndc4Q3TR08 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fndc4Q3TR08 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Fndc4Q3TR08 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fndc4Q3TR08 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fndc4Q3TR08 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.94□□□□□ -0.34
Fndc4Q3TR08 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fndc4Q3TR08 Gm12134-201ENSMUST00000122109 520 ntBASIC12.94□□□□□ -0.34
Fndc4Q3TR08 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.94□□□□□ -0.34
Fndc4Q3TR08 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Fndc4Q3TR08 Rprl3-201ENSMUST00000157400 290 ntBASIC12.94□□□□□ -0.34
Fndc4Q3TR08 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.94□□□□□ -0.34
Fndc4Q3TR08 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Fndc4Q3TR08 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fndc4Q3TR08 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fndc4Q3TR08 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.94□□□□□ -0.34
Fndc4Q3TR08 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Fndc4Q3TR08 Gm7367-201ENSMUST00000057611 492 ntBASIC12.94□□□□□ -0.34
Fndc4Q3TR08 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Fndc4Q3TR08 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fndc4Q3TR08 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Fndc4Q3TR08 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fndc4Q3TR08 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fndc4Q3TR08 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Fndc4Q3TR08 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fndc4Q3TR08 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fndc4Q3TR08 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fndc4Q3TR08 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Fndc4Q3TR08 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Fndc4Q3TR08 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Fndc4Q3TR08 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Efs-202ENSMUST00000227037 2540 ntBASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Mir3081-201ENSMUST00000175305 84 ntBASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.93□□□□□ -0.34
Fndc4Q3TR08 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fndc4Q3TR08 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fndc4Q3TR08 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Fndc4Q3TR08 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fndc4Q3TR08 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Fndc4Q3TR08 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Fndc4Q3TR08 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fndc4Q3TR08 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fndc4Q3TR08 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Fndc4Q3TR08 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fndc4Q3TR08 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Fndc4Q3TR08 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Fndc4Q3TR08 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Fndc4Q3TR08 Gm21362-201ENSMUST00000194272 928 ntBASIC12.92□□□□□ -0.34
Fndc4Q3TR08 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Fndc4Q3TR08 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.92□□□□□ -0.34
Fndc4Q3TR08 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fndc4Q3TR08 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Fndc4Q3TR08 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms