Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ctdnep1Q3TP92 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ctdnep1Q3TP92 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ctdnep1Q3TP92 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ctdnep1Q3TP92 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Ctdnep1Q3TP92 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Ctdnep1Q3TP92 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Ctdnep1Q3TP92 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Ctdnep1Q3TP92 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Ctdnep1Q3TP92 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ctdnep1Q3TP92 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ctdnep1Q3TP92 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.47■□□□□ 0.39
Ctdnep1Q3TP92 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ctdnep1Q3TP92 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ctdnep1Q3TP92 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ctdnep1Q3TP92 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ctdnep1Q3TP92 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.47■□□□□ 0.39
Ctdnep1Q3TP92 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ctdnep1Q3TP92 Gm12350-201ENSMUST00000121208 462 ntBASIC17.47■□□□□ 0.39
Ctdnep1Q3TP92 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.47■□□□□ 0.39
Ctdnep1Q3TP92 Gm27300-201ENSMUST00000184085 97 ntBASIC17.47■□□□□ 0.39
Ctdnep1Q3TP92 Gm27335-201ENSMUST00000184758 97 ntBASIC17.47■□□□□ 0.39
Ctdnep1Q3TP92 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ctdnep1Q3TP92 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ctdnep1Q3TP92 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.47■□□□□ 0.39
Ctdnep1Q3TP92 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ctdnep1Q3TP92 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ctdnep1Q3TP92 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ctdnep1Q3TP92 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ctdnep1Q3TP92 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Ctdnep1Q3TP92 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ctdnep1Q3TP92 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.47■□□□□ 0.39
Ctdnep1Q3TP92 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ctdnep1Q3TP92 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ctdnep1Q3TP92 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Ctdnep1Q3TP92 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ctdnep1Q3TP92 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ctdnep1Q3TP92 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ctdnep1Q3TP92 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ctdnep1Q3TP92 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Ctdnep1Q3TP92 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ctdnep1Q3TP92 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ctdnep1Q3TP92 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ctdnep1Q3TP92 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ctdnep1Q3TP92 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ctdnep1Q3TP92 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ctdnep1Q3TP92 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ctdnep1Q3TP92 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.46■□□□□ 0.39
Ctdnep1Q3TP92 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ctdnep1Q3TP92 Gm7787-201ENSMUST00000216858 688 ntBASIC17.46■□□□□ 0.39
Ctdnep1Q3TP92 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ctdnep1Q3TP92 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Ctdnep1Q3TP92 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Ctdnep1Q3TP92 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ctdnep1Q3TP92 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ctdnep1Q3TP92 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ctdnep1Q3TP92 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ctdnep1Q3TP92 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ctdnep1Q3TP92 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ctdnep1Q3TP92 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ctdnep1Q3TP92 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ctdnep1Q3TP92 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ctdnep1Q3TP92 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Ctdnep1Q3TP92 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ctdnep1Q3TP92 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ctdnep1Q3TP92 Gm43509-201ENSMUST00000196551 2594 ntBASIC17.45■□□□□ 0.38
Ctdnep1Q3TP92 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ctdnep1Q3TP92 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ctdnep1Q3TP92 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ctdnep1Q3TP92 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ctdnep1Q3TP92 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ctdnep1Q3TP92 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ctdnep1Q3TP92 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ctdnep1Q3TP92 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ctdnep1Q3TP92 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ctdnep1Q3TP92 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ctdnep1Q3TP92 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.45■□□□□ 0.38
Ctdnep1Q3TP92 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.45■□□□□ 0.38
Ctdnep1Q3TP92 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.45■□□□□ 0.38
Ctdnep1Q3TP92 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.45■□□□□ 0.38
Ctdnep1Q3TP92 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ctdnep1Q3TP92 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ctdnep1Q3TP92 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.45■□□□□ 0.38
Ctdnep1Q3TP92 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Ctdnep1Q3TP92 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ctdnep1Q3TP92 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ctdnep1Q3TP92 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ctdnep1Q3TP92 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ctdnep1Q3TP92 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.45■□□□□ 0.38
Ctdnep1Q3TP92 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.45■□□□□ 0.38
Ctdnep1Q3TP92 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ctdnep1Q3TP92 Gm5366-201ENSMUST00000215494 1338 ntBASIC17.45■□□□□ 0.38
Ctdnep1Q3TP92 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ctdnep1Q3TP92 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ctdnep1Q3TP92 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ctdnep1Q3TP92 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
Ctdnep1Q3TP92 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Ctdnep1Q3TP92 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Ctdnep1Q3TP92 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ctdnep1Q3TP92 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms