Protein–RNA interactions for Protein: Q3TIR1

Trappc13, Trafficking protein particle complex subunit 13, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc13Q3TIR1 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.12□□□□□ -0.15
Trappc13Q3TIR1 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trappc13Q3TIR1 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trappc13Q3TIR1 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trappc13Q3TIR1 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.12□□□□□ -0.15
Trappc13Q3TIR1 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trappc13Q3TIR1 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trappc13Q3TIR1 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trappc13Q3TIR1 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trappc13Q3TIR1 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trappc13Q3TIR1 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.12□□□□□ -0.15
Trappc13Q3TIR1 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trappc13Q3TIR1 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trappc13Q3TIR1 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.12□□□□□ -0.15
Trappc13Q3TIR1 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trappc13Q3TIR1 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.12□□□□□ -0.15
Trappc13Q3TIR1 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trappc13Q3TIR1 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trappc13Q3TIR1 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.12□□□□□ -0.15
Trappc13Q3TIR1 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trappc13Q3TIR1 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trappc13Q3TIR1 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Trappc13Q3TIR1 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
Trappc13Q3TIR1 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trappc13Q3TIR1 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trappc13Q3TIR1 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trappc13Q3TIR1 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trappc13Q3TIR1 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.11□□□□□ -0.15
Trappc13Q3TIR1 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trappc13Q3TIR1 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.11□□□□□ -0.15
Trappc13Q3TIR1 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trappc13Q3TIR1 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trappc13Q3TIR1 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trappc13Q3TIR1 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trappc13Q3TIR1 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trappc13Q3TIR1 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trappc13Q3TIR1 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Trappc13Q3TIR1 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trappc13Q3TIR1 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.11□□□□□ -0.15
Trappc13Q3TIR1 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trappc13Q3TIR1 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.11□□□□□ -0.15
Trappc13Q3TIR1 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Trappc13Q3TIR1 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trappc13Q3TIR1 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trappc13Q3TIR1 Gm27646-201ENSMUST00000183989 110 ntBASIC14.11□□□□□ -0.15
Trappc13Q3TIR1 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.11□□□□□ -0.15
Trappc13Q3TIR1 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trappc13Q3TIR1 Gm6296-201ENSMUST00000222599 943 ntBASIC14.11□□□□□ -0.15
Trappc13Q3TIR1 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Trappc13Q3TIR1 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trappc13Q3TIR1 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trappc13Q3TIR1 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trappc13Q3TIR1 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trappc13Q3TIR1 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trappc13Q3TIR1 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trappc13Q3TIR1 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trappc13Q3TIR1 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.11□□□□□ -0.15
Trappc13Q3TIR1 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trappc13Q3TIR1 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trappc13Q3TIR1 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trappc13Q3TIR1 Efs-202ENSMUST00000227037 2540 ntBASIC14.1□□□□□ -0.15
Trappc13Q3TIR1 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trappc13Q3TIR1 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trappc13Q3TIR1 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trappc13Q3TIR1 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Trappc13Q3TIR1 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trappc13Q3TIR1 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trappc13Q3TIR1 Gm4535-201ENSMUST00000182274 558 ntBASIC14.1□□□□□ -0.15
Trappc13Q3TIR1 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.1□□□□□ -0.15
Trappc13Q3TIR1 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trappc13Q3TIR1 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trappc13Q3TIR1 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trappc13Q3TIR1 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trappc13Q3TIR1 Gm10355-201ENSMUST00000097146 517 ntBASIC14.1□□□□□ -0.15
Trappc13Q3TIR1 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.1□□□□□ -0.15
Trappc13Q3TIR1 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trappc13Q3TIR1 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trappc13Q3TIR1 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trappc13Q3TIR1 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trappc13Q3TIR1 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trappc13Q3TIR1 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.1□□□□□ -0.15
Trappc13Q3TIR1 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trappc13Q3TIR1 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trappc13Q3TIR1 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.09□□□□□ -0.15
Trappc13Q3TIR1 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.09□□□□□ -0.15
Trappc13Q3TIR1 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trappc13Q3TIR1 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trappc13Q3TIR1 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Trappc13Q3TIR1 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trappc13Q3TIR1 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trappc13Q3TIR1 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trappc13Q3TIR1 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trappc13Q3TIR1 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.09□□□□□ -0.15
Trappc13Q3TIR1 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trappc13Q3TIR1 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trappc13Q3TIR1 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trappc13Q3TIR1 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trappc13Q3TIR1 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.09□□□□□ -0.15
Trappc13Q3TIR1 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trappc13Q3TIR1 Gm11780-201ENSMUST00000136880 516 ntBASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms