Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atf4Q06507 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atf4Q06507 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atf4Q06507 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atf4Q06507 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atf4Q06507 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atf4Q06507 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atf4Q06507 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.44□□□□□ -0.1
Atf4Q06507 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Atf4Q06507 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Atf4Q06507 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Atf4Q06507 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atf4Q06507 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Atf4Q06507 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf4Q06507 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf4Q06507 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf4Q06507 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC14.43□□□□□ -0.1
Atf4Q06507 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Atf4Q06507 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf4Q06507 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Atf4Q06507 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Atf4Q06507 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf4Q06507 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf4Q06507 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Atf4Q06507 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf4Q06507 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Atf4Q06507 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf4Q06507 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf4Q06507 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.43□□□□□ -0.1
Atf4Q06507 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf4Q06507 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.43□□□□□ -0.1
Atf4Q06507 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.43□□□□□ -0.1
Atf4Q06507 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf4Q06507 Gm18622-201ENSMUST00000219361 595 ntBASIC14.43□□□□□ -0.1
Atf4Q06507 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf4Q06507 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf4Q06507 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf4Q06507 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Atf4Q06507 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf4Q06507 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Atf4Q06507 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf4Q06507 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Atf4Q06507 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Atf4Q06507 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf4Q06507 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Atf4Q06507 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atf4Q06507 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf4Q06507 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf4Q06507 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.42□□□□□ -0.1
Atf4Q06507 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Atf4Q06507 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Atf4Q06507 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf4Q06507 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Atf4Q06507 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Atf4Q06507 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf4Q06507 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf4Q06507 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf4Q06507 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Atf4Q06507 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Atf4Q06507 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf4Q06507 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.42□□□□□ -0.1
Atf4Q06507 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.42□□□□□ -0.1
Atf4Q06507 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf4Q06507 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Atf4Q06507 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Atf4Q06507 Gm27300-201ENSMUST00000184085 97 ntBASIC14.42□□□□□ -0.1
Atf4Q06507 Gm27335-201ENSMUST00000184758 97 ntBASIC14.42□□□□□ -0.1
Atf4Q06507 Gm27321-201ENSMUST00000185021 205 ntBASIC14.42□□□□□ -0.1
Atf4Q06507 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.42□□□□□ -0.1
Atf4Q06507 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf4Q06507 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf4Q06507 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf4Q06507 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Atf4Q06507 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf4Q06507 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf4Q06507 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Atf4Q06507 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf4Q06507 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf4Q06507 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf4Q06507 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf4Q06507 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Atf4Q06507 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Atf4Q06507 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf4Q06507 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf4Q06507 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Atf4Q06507 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
Atf4Q06507 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf4Q06507 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf4Q06507 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.42□□□□□ -0.1
Atf4Q06507 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf4Q06507 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf4Q06507 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atf4Q06507 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atf4Q06507 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Atf4Q06507 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atf4Q06507 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atf4Q06507 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Atf4Q06507 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Atf4Q06507 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atf4Q06507 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms