Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacna1sQ02789 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacna1sQ02789 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
Cacna1sQ02789 Gm18307-201ENSMUST00000206864 949 ntBASIC18.85■□□□□ 0.61
Cacna1sQ02789 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Cacna1sQ02789 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC18.85■□□□□ 0.61
Cacna1sQ02789 Gm9816-201ENSMUST00000122292 1414 ntBASIC18.85■□□□□ 0.61
Cacna1sQ02789 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC18.85■□□□□ 0.61
Cacna1sQ02789 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacna1sQ02789 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacna1sQ02789 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacna1sQ02789 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Cacna1sQ02789 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC18.84■□□□□ 0.61
Cacna1sQ02789 AC121598.1-201ENSMUST00000228224 1019 ntBASIC18.84■□□□□ 0.61
Cacna1sQ02789 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacna1sQ02789 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Cacna1sQ02789 Olfr582-201ENSMUST00000098212 960 ntBASIC18.84■□□□□ 0.61
Cacna1sQ02789 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Cacna1sQ02789 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacna1sQ02789 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cacna1sQ02789 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC18.84■□□□□ 0.61
Cacna1sQ02789 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Cacna1sQ02789 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Cacna1sQ02789 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Cacna1sQ02789 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Cacna1sQ02789 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacna1sQ02789 Mup-ps23-201ENSMUST00000118063 630 ntBASIC18.84■□□□□ 0.61
Cacna1sQ02789 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacna1sQ02789 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC18.84■□□□□ 0.61
Cacna1sQ02789 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Cacna1sQ02789 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacna1sQ02789 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC18.84■□□□□ 0.61
Cacna1sQ02789 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacna1sQ02789 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacna1sQ02789 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacna1sQ02789 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Cacna1sQ02789 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC18.83■□□□□ 0.61
Cacna1sQ02789 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Cacna1sQ02789 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.83■□□□□ 0.61
Cacna1sQ02789 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cacna1sQ02789 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cacna1sQ02789 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cacna1sQ02789 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC18.83■□□□□ 0.6
Cacna1sQ02789 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC18.83■□□□□ 0.6
Cacna1sQ02789 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cacna1sQ02789 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC18.83■□□□□ 0.6
Cacna1sQ02789 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cacna1sQ02789 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC18.83■□□□□ 0.6
Cacna1sQ02789 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cacna1sQ02789 Mxra8os-201ENSMUST00000097740 687 ntBASIC18.83■□□□□ 0.6
Cacna1sQ02789 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cacna1sQ02789 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cacna1sQ02789 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.83■□□□□ 0.6
Cacna1sQ02789 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cacna1sQ02789 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cacna1sQ02789 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cacna1sQ02789 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Cacna1sQ02789 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cacna1sQ02789 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.83■□□□□ 0.6
Cacna1sQ02789 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC18.82■□□□□ 0.6
Cacna1sQ02789 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.82■□□□□ 0.6
Cacna1sQ02789 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1sQ02789 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1sQ02789 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1sQ02789 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1sQ02789 Gm15460-201ENSMUST00000118147 391 ntBASIC18.82■□□□□ 0.6
Cacna1sQ02789 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC18.82■□□□□ 0.6
Cacna1sQ02789 Gm27731-201ENSMUST00000185192 107 ntBASIC18.82■□□□□ 0.6
Cacna1sQ02789 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Cacna1sQ02789 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC18.82■□□□□ 0.6
Cacna1sQ02789 CT009713.10-202ENSMUST00000225734 696 ntBASIC18.82■□□□□ 0.6
Cacna1sQ02789 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1sQ02789 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1sQ02789 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1sQ02789 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1sQ02789 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC18.82■□□□□ 0.6
Cacna1sQ02789 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cacna1sQ02789 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1sQ02789 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1sQ02789 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC18.82■□□□□ 0.6
Cacna1sQ02789 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC18.82■□□□□ 0.6
Cacna1sQ02789 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1sQ02789 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1sQ02789 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1sQ02789 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1sQ02789 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1sQ02789 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1sQ02789 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1sQ02789 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1sQ02789 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1sQ02789 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1sQ02789 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Cacna1sQ02789 AC153872.1-201ENSMUST00000199539 128 ntBASIC18.81■□□□□ 0.6
Cacna1sQ02789 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1sQ02789 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC18.81■□□□□ 0.6
Cacna1sQ02789 Gm17794-201ENSMUST00000220252 955 ntBASIC18.81■□□□□ 0.6
Cacna1sQ02789 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1sQ02789 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1sQ02789 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.81■□□□□ 0.6
Cacna1sQ02789 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms