Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.74□□□□□ -0.37
Npas1P97459 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Npas1P97459 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.74□□□□□ -0.37
Npas1P97459 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Npas1P97459 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Npas1P97459 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Npas1P97459 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Npas1P97459 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Npas1P97459 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npas1P97459 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npas1P97459 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Npas1P97459 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npas1P97459 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.73□□□□□ -0.37
Npas1P97459 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npas1P97459 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npas1P97459 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npas1P97459 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npas1P97459 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Npas1P97459 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npas1P97459 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.73□□□□□ -0.37
Npas1P97459 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Npas1P97459 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npas1P97459 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.73□□□□□ -0.37
Npas1P97459 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npas1P97459 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npas1P97459 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npas1P97459 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npas1P97459 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.73□□□□□ -0.37
Npas1P97459 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Npas1P97459 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npas1P97459 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npas1P97459 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npas1P97459 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npas1P97459 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npas1P97459 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npas1P97459 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npas1P97459 Matn2-206ENSMUST00000228570 2798 ntBASIC12.73□□□□□ -0.37
Npas1P97459 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npas1P97459 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npas1P97459 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npas1P97459 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npas1P97459 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Npas1P97459 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npas1P97459 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npas1P97459 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Npas1P97459 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Npas1P97459 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Npas1P97459 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Npas1P97459 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Npas1P97459 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Npas1P97459 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Npas1P97459 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Npas1P97459 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC12.72□□□□□ -0.37
Npas1P97459 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC12.72□□□□□ -0.37
Npas1P97459 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.72□□□□□ -0.37
Npas1P97459 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Npas1P97459 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Npas1P97459 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Npas1P97459 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Npas1P97459 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Npas1P97459 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.72□□□□□ -0.37
Npas1P97459 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.72□□□□□ -0.37
Npas1P97459 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Npas1P97459 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Npas1P97459 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Npas1P97459 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Npas1P97459 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Npas1P97459 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Npas1P97459 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Npas1P97459 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Npas1P97459 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Npas1P97459 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Npas1P97459 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Npas1P97459 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.37
Npas1P97459 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Npas1P97459 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Npas1P97459 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Npas1P97459 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Npas1P97459 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Npas1P97459 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Npas1P97459 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Npas1P97459 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.71□□□□□ -0.37
Npas1P97459 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC12.71□□□□□ -0.37
Npas1P97459 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Npas1P97459 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Npas1P97459 Gm27011-201ENSMUST00000182352 972 ntBASIC12.71□□□□□ -0.37
Npas1P97459 Mir1668-201ENSMUST00000184114 107 ntBASIC12.71□□□□□ -0.37
Npas1P97459 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.71□□□□□ -0.37
Npas1P97459 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Npas1P97459 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Npas1P97459 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Npas1P97459 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Npas1P97459 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Npas1P97459 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Npas1P97459 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Npas1P97459 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Npas1P97459 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Npas1P97459 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Npas1P97459 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Npas1P97459 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms