Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
CiitaP79621 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CiitaP79621 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CiitaP79621 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CiitaP79621 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC16.37■□□□□ 0.21
CiitaP79621 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CiitaP79621 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.37■□□□□ 0.21
CiitaP79621 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC16.37■□□□□ 0.21
CiitaP79621 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.37■□□□□ 0.21
CiitaP79621 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.37■□□□□ 0.21
CiitaP79621 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CiitaP79621 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CiitaP79621 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CiitaP79621 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CiitaP79621 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CiitaP79621 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.37■□□□□ 0.21
CiitaP79621 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CiitaP79621 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CiitaP79621 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CiitaP79621 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CiitaP79621 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.36■□□□□ 0.21
CiitaP79621 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CiitaP79621 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CiitaP79621 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CiitaP79621 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CiitaP79621 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CiitaP79621 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CiitaP79621 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CiitaP79621 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.36■□□□□ 0.21
CiitaP79621 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.36■□□□□ 0.21
CiitaP79621 Rprl2-201ENSMUST00000157150 290 ntBASIC16.36■□□□□ 0.21
CiitaP79621 Gm18889-201ENSMUST00000174284 929 ntBASIC16.36■□□□□ 0.21
CiitaP79621 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
CiitaP79621 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
CiitaP79621 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CiitaP79621 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CiitaP79621 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CiitaP79621 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CiitaP79621 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CiitaP79621 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CiitaP79621 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CiitaP79621 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.36■□□□□ 0.21
CiitaP79621 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CiitaP79621 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CiitaP79621 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CiitaP79621 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.36■□□□□ 0.21
CiitaP79621 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CiitaP79621 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CiitaP79621 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CiitaP79621 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CiitaP79621 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CiitaP79621 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CiitaP79621 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.35■□□□□ 0.21
CiitaP79621 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.35■□□□□ 0.21
CiitaP79621 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CiitaP79621 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CiitaP79621 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CiitaP79621 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CiitaP79621 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CiitaP79621 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.35■□□□□ 0.21
CiitaP79621 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.35■□□□□ 0.21
CiitaP79621 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.35■□□□□ 0.21
CiitaP79621 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CiitaP79621 Mir6990-201ENSMUST00000183724 91 ntBASIC16.35■□□□□ 0.21
CiitaP79621 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.35■□□□□ 0.21
CiitaP79621 Gm44335-201ENSMUST00000196879 141 ntBASIC16.35■□□□□ 0.21
CiitaP79621 Gm44297-201ENSMUST00000198304 141 ntBASIC16.35■□□□□ 0.21
CiitaP79621 Gm44346-201ENSMUST00000198851 141 ntBASIC16.35■□□□□ 0.21
CiitaP79621 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.35■□□□□ 0.21
CiitaP79621 Gm18057-201ENSMUST00000208220 503 ntBASIC16.35■□□□□ 0.21
CiitaP79621 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.35■□□□□ 0.21
CiitaP79621 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC16.35■□□□□ 0.21
CiitaP79621 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
CiitaP79621 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CiitaP79621 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CiitaP79621 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.35■□□□□ 0.21
CiitaP79621 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CiitaP79621 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CiitaP79621 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CiitaP79621 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CiitaP79621 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CiitaP79621 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CiitaP79621 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CiitaP79621 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CiitaP79621 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CiitaP79621 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CiitaP79621 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CiitaP79621 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CiitaP79621 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CiitaP79621 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.34■□□□□ 0.21
CiitaP79621 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC16.34■□□□□ 0.21
CiitaP79621 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.34■□□□□ 0.21
CiitaP79621 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CiitaP79621 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CiitaP79621 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.34■□□□□ 0.21
CiitaP79621 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CiitaP79621 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CiitaP79621 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CiitaP79621 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CiitaP79621 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms