Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shox2P70390 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Shox2P70390 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shox2P70390 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shox2P70390 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shox2P70390 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Shox2P70390 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shox2P70390 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.98□□□□□ -0.01
Shox2P70390 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shox2P70390 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Shox2P70390 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Shox2P70390 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.98□□□□□ -0.01
Shox2P70390 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shox2P70390 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.98□□□□□ -0.01
Shox2P70390 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shox2P70390 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.98□□□□□ -0.01
Shox2P70390 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shox2P70390 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Shox2P70390 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Shox2P70390 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shox2P70390 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shox2P70390 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Shox2P70390 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Shox2P70390 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shox2P70390 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Shox2P70390 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shox2P70390 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shox2P70390 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Shox2P70390 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.98□□□□□ -0.01
Shox2P70390 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shox2P70390 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Shox2P70390 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Shox2P70390 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shox2P70390 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shox2P70390 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Shox2P70390 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shox2P70390 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shox2P70390 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.97□□□□□ -0.01
Shox2P70390 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shox2P70390 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Shox2P70390 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Shox2P70390 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shox2P70390 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shox2P70390 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shox2P70390 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shox2P70390 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Shox2P70390 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
Shox2P70390 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.97□□□□□ -0.01
Shox2P70390 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Shox2P70390 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.97□□□□□ -0.01
Shox2P70390 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.97□□□□□ -0.01
Shox2P70390 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.97□□□□□ -0.01
Shox2P70390 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shox2P70390 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Shox2P70390 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shox2P70390 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Shox2P70390 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Shox2P70390 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.97□□□□□ -0.01
Shox2P70390 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shox2P70390 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shox2P70390 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shox2P70390 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shox2P70390 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Shox2P70390 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.96□□□□□ -0.01
Shox2P70390 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shox2P70390 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.96□□□□□ -0.01
Shox2P70390 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shox2P70390 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.96□□□□□ -0.01
Shox2P70390 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shox2P70390 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shox2P70390 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shox2P70390 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shox2P70390 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shox2P70390 Gm12441-201ENSMUST00000121806 588 ntBASIC14.96□□□□□ -0.01
Shox2P70390 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Shox2P70390 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.96□□□□□ -0.01
Shox2P70390 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Shox2P70390 Mir1668-201ENSMUST00000184114 107 ntBASIC14.96□□□□□ -0.01
Shox2P70390 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.96□□□□□ -0.01
Shox2P70390 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shox2P70390 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shox2P70390 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.96□□□□□ -0.02
Shox2P70390 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Shox2P70390 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.96□□□□□ -0.02
Shox2P70390 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Shox2P70390 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
Shox2P70390 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shox2P70390 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Shox2P70390 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shox2P70390 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Shox2P70390 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shox2P70390 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shox2P70390 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shox2P70390 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shox2P70390 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shox2P70390 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shox2P70390 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Shox2P70390 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shox2P70390 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Shox2P70390 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms