Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Crnkl1P63154 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Crnkl1P63154 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Crnkl1P63154 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Crnkl1P63154 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Crnkl1P63154 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Crnkl1P63154 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Crnkl1P63154 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Crnkl1P63154 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Crnkl1P63154 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Crnkl1P63154 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.03■□□□□ -0
Crnkl1P63154 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.03■□□□□ -0
Crnkl1P63154 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.03■□□□□ -0
Crnkl1P63154 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.03■□□□□ -0
Crnkl1P63154 Gm5587-201ENSMUST00000206270 674 ntBASIC15.03■□□□□ -0
Crnkl1P63154 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Crnkl1P63154 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.03■□□□□ -0
Crnkl1P63154 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Crnkl1P63154 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Crnkl1P63154 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Crnkl1P63154 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Crnkl1P63154 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Crnkl1P63154 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Crnkl1P63154 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.03■□□□□ -0
Crnkl1P63154 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Crnkl1P63154 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Crnkl1P63154 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Crnkl1P63154 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Crnkl1P63154 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Crnkl1P63154 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.03■□□□□ -0
Crnkl1P63154 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.02■□□□□ -0
Crnkl1P63154 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Crnkl1P63154 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
Crnkl1P63154 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Crnkl1P63154 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.02■□□□□ -0
Crnkl1P63154 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Crnkl1P63154 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Crnkl1P63154 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Crnkl1P63154 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Crnkl1P63154 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Crnkl1P63154 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Crnkl1P63154 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.02■□□□□ -0
Crnkl1P63154 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Crnkl1P63154 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Crnkl1P63154 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Crnkl1P63154 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Crnkl1P63154 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.02■□□□□ -0
Crnkl1P63154 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.02■□□□□ -0
Crnkl1P63154 Gm18115-201ENSMUST00000221209 621 ntBASIC15.02■□□□□ -0
Crnkl1P63154 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Crnkl1P63154 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Crnkl1P63154 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Crnkl1P63154 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Crnkl1P63154 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Crnkl1P63154 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Crnkl1P63154 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Crnkl1P63154 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Crnkl1P63154 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Crnkl1P63154 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Crnkl1P63154 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Crnkl1P63154 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.02□□□□□ -0.01
Crnkl1P63154 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Crnkl1P63154 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Crnkl1P63154 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Crnkl1P63154 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Crnkl1P63154 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Crnkl1P63154 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Crnkl1P63154 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Crnkl1P63154 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Crnkl1P63154 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Crnkl1P63154 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Crnkl1P63154 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Crnkl1P63154 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Crnkl1P63154 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.01□□□□□ -0.01
Crnkl1P63154 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Crnkl1P63154 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Crnkl1P63154 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Crnkl1P63154 Gm11336-201ENSMUST00000118168 334 ntBASIC15.01□□□□□ -0.01
Crnkl1P63154 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Crnkl1P63154 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Crnkl1P63154 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Crnkl1P63154 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Crnkl1P63154 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Crnkl1P63154 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Crnkl1P63154 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Crnkl1P63154 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.01□□□□□ -0.01
Crnkl1P63154 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Crnkl1P63154 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Crnkl1P63154 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Crnkl1P63154 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Crnkl1P63154 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.01□□□□□ -0.01
Crnkl1P63154 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Crnkl1P63154 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Crnkl1P63154 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Crnkl1P63154 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Crnkl1P63154 Gm8258-201ENSMUST00000055593 1449 ntBASIC15□□□□□ -0.01
Crnkl1P63154 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Crnkl1P63154 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Crnkl1P63154 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Crnkl1P63154 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms