Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ThraP63058 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
ThraP63058 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ThraP63058 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.34■□□□□ 0.05
ThraP63058 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ThraP63058 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ThraP63058 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ThraP63058 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ThraP63058 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ThraP63058 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.34■□□□□ 0.05
ThraP63058 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.34■□□□□ 0.05
ThraP63058 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.34■□□□□ 0.05
ThraP63058 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ThraP63058 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ThraP63058 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ThraP63058 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
ThraP63058 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ThraP63058 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
ThraP63058 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.34■□□□□ 0.05
ThraP63058 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
ThraP63058 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ThraP63058 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ThraP63058 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ThraP63058 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ThraP63058 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ThraP63058 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
ThraP63058 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
ThraP63058 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ThraP63058 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.05
ThraP63058 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
ThraP63058 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
ThraP63058 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
ThraP63058 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
ThraP63058 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
ThraP63058 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
ThraP63058 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
ThraP63058 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.33■□□□□ 0.04
ThraP63058 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ThraP63058 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ThraP63058 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ThraP63058 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ThraP63058 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
ThraP63058 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ThraP63058 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.33■□□□□ 0.04
ThraP63058 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.33■□□□□ 0.04
ThraP63058 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ThraP63058 Gm9727-201ENSMUST00000161387 555 ntBASIC15.33■□□□□ 0.04
ThraP63058 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
ThraP63058 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.33■□□□□ 0.04
ThraP63058 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.33■□□□□ 0.04
ThraP63058 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ThraP63058 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
ThraP63058 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ThraP63058 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.33■□□□□ 0.04
ThraP63058 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ThraP63058 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ThraP63058 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
ThraP63058 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ThraP63058 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.33■□□□□ 0.04
ThraP63058 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ThraP63058 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ThraP63058 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ThraP63058 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ThraP63058 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.33■□□□□ 0.04
ThraP63058 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
ThraP63058 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ThraP63058 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.33■□□□□ 0.04
ThraP63058 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ThraP63058 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ThraP63058 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
ThraP63058 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ThraP63058 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ThraP63058 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ThraP63058 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
ThraP63058 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ThraP63058 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
ThraP63058 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ThraP63058 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ThraP63058 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ThraP63058 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ThraP63058 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ThraP63058 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ThraP63058 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ThraP63058 Gm14494-201ENSMUST00000118786 435 ntBASIC15.32■□□□□ 0.04
ThraP63058 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.32■□□□□ 0.04
ThraP63058 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ThraP63058 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
ThraP63058 Gm27702-201ENSMUST00000184512 56 ntBASIC15.32■□□□□ 0.04
ThraP63058 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.32■□□□□ 0.04
ThraP63058 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.32■□□□□ 0.04
ThraP63058 Gm18622-201ENSMUST00000219361 595 ntBASIC15.32■□□□□ 0.04
ThraP63058 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.32■□□□□ 0.04
ThraP63058 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
ThraP63058 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ThraP63058 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ThraP63058 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ThraP63058 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
ThraP63058 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ThraP63058 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ThraP63058 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms