Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm6P62313 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.29□□□□□ -0.28
Lsm6P62313 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm6P62313 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm6P62313 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm6P62313 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm6P62313 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm6P62313 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm6P62313 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm6P62313 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm6P62313 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm6P62313 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.28□□□□□ -0.28
Lsm6P62313 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm6P62313 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm6P62313 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.28□□□□□ -0.28
Lsm6P62313 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Lsm6P62313 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm6P62313 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Lsm6P62313 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm6P62313 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.28□□□□□ -0.28
Lsm6P62313 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.28□□□□□ -0.28
Lsm6P62313 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm6P62313 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Lsm6P62313 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm6P62313 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm6P62313 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm6P62313 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm6P62313 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm6P62313 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm6P62313 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm6P62313 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm6P62313 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Lsm6P62313 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm6P62313 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm6P62313 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm6P62313 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Lsm6P62313 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm6P62313 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Lsm6P62313 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm6P62313 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Lsm6P62313 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm6P62313 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm6P62313 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.27□□□□□ -0.28
Lsm6P62313 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Lsm6P62313 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Lsm6P62313 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lsm6P62313 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Lsm6P62313 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lsm6P62313 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Lsm6P62313 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lsm6P62313 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lsm6P62313 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lsm6P62313 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.27□□□□□ -0.28
Lsm6P62313 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Lsm6P62313 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lsm6P62313 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lsm6P62313 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lsm6P62313 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lsm6P62313 Gm15173-201ENSMUST00000122049 433 ntBASIC13.27□□□□□ -0.29
Lsm6P62313 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lsm6P62313 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.27□□□□□ -0.29
Lsm6P62313 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lsm6P62313 Gm28659-201ENSMUST00000188013 759 ntBASIC13.27□□□□□ -0.29
Lsm6P62313 Gm10060-201ENSMUST00000212002 111 ntBASIC13.27□□□□□ -0.29
Lsm6P62313 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lsm6P62313 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.27□□□□□ -0.29
Lsm6P62313 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Lsm6P62313 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lsm6P62313 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lsm6P62313 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lsm6P62313 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Lsm6P62313 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lsm6P62313 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lsm6P62313 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lsm6P62313 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lsm6P62313 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lsm6P62313 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lsm6P62313 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lsm6P62313 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lsm6P62313 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lsm6P62313 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Lsm6P62313 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.27□□□□□ -0.29
Lsm6P62313 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lsm6P62313 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lsm6P62313 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lsm6P62313 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lsm6P62313 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.27□□□□□ -0.29
Lsm6P62313 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lsm6P62313 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.26□□□□□ -0.29
Lsm6P62313 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Lsm6P62313 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Lsm6P62313 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Lsm6P62313 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Lsm6P62313 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lsm6P62313 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Lsm6P62313 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Lsm6P62313 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lsm6P62313 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.26□□□□□ -0.29
Lsm6P62313 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lsm6P62313 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms