Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm3P62311 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.86□□□□□ -0.19
Lsm3P62311 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm3P62311 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm3P62311 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Lsm3P62311 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm3P62311 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm3P62311 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.86□□□□□ -0.19
Lsm3P62311 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm3P62311 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC13.86□□□□□ -0.19
Lsm3P62311 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC13.86□□□□□ -0.19
Lsm3P62311 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.86□□□□□ -0.19
Lsm3P62311 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm3P62311 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm3P62311 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm3P62311 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm3P62311 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm3P62311 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm3P62311 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm3P62311 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm3P62311 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.86□□□□□ -0.19
Lsm3P62311 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm3P62311 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm3P62311 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
Lsm3P62311 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm3P62311 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm3P62311 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm3P62311 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm3P62311 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm3P62311 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
Lsm3P62311 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.85□□□□□ -0.19
Lsm3P62311 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm3P62311 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm3P62311 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC13.85□□□□□ -0.19
Lsm3P62311 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm3P62311 Gm7367-201ENSMUST00000057611 492 ntBASIC13.85□□□□□ -0.19
Lsm3P62311 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm3P62311 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm3P62311 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Lsm3P62311 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm3P62311 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Lsm3P62311 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Lsm3P62311 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm3P62311 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm3P62311 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm3P62311 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm3P62311 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm3P62311 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm3P62311 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm3P62311 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.85□□□□□ -0.19
Lsm3P62311 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm3P62311 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Lsm3P62311 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Lsm3P62311 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm3P62311 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm3P62311 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm3P62311 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm3P62311 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm3P62311 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm3P62311 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm3P62311 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.84□□□□□ -0.19
Lsm3P62311 Gm13181-201ENSMUST00000120117 1069 ntBASIC13.84□□□□□ -0.19
Lsm3P62311 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm3P62311 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.84□□□□□ -0.19
Lsm3P62311 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC13.84□□□□□ -0.19
Lsm3P62311 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC13.84□□□□□ -0.19
Lsm3P62311 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm3P62311 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm3P62311 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm3P62311 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm3P62311 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Lsm3P62311 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm3P62311 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm3P62311 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm3P62311 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm3P62311 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm3P62311 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm3P62311 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Lsm3P62311 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm3P62311 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm3P62311 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.84□□□□□ -0.19
Lsm3P62311 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm3P62311 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm3P62311 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.19
Lsm3P62311 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lsm3P62311 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lsm3P62311 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lsm3P62311 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lsm3P62311 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.83□□□□□ -0.2
Lsm3P62311 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.83□□□□□ -0.2
Lsm3P62311 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Lsm3P62311 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm3P62311 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm3P62311 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm3P62311 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm3P62311 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm3P62311 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm3P62311 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm3P62311 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm3P62311 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms