Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 Ldb3-207ENSMUST00000227819 1499 ntBASIC17.76■□□□□ 0.43
Lrch1P62046 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lrch1P62046 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Lrch1P62046 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lrch1P62046 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lrch1P62046 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lrch1P62046 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lrch1P62046 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC17.76■□□□□ 0.43
Lrch1P62046 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lrch1P62046 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lrch1P62046 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lrch1P62046 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lrch1P62046 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.76■□□□□ 0.43
Lrch1P62046 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lrch1P62046 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lrch1P62046 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lrch1P62046 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lrch1P62046 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lrch1P62046 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lrch1P62046 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC17.75■□□□□ 0.43
Lrch1P62046 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lrch1P62046 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Lrch1P62046 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC17.75■□□□□ 0.43
Lrch1P62046 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lrch1P62046 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lrch1P62046 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Lrch1P62046 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC17.75■□□□□ 0.43
Lrch1P62046 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lrch1P62046 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lrch1P62046 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lrch1P62046 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.75■□□□□ 0.43
Lrch1P62046 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.75■□□□□ 0.43
Lrch1P62046 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lrch1P62046 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.75■□□□□ 0.43
Lrch1P62046 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Lrch1P62046 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Lrch1P62046 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrch1P62046 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrch1P62046 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lrch1P62046 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrch1P62046 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrch1P62046 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Lrch1P62046 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC17.74■□□□□ 0.43
Lrch1P62046 Gm15653-201ENSMUST00000119247 907 ntBASIC17.74■□□□□ 0.43
Lrch1P62046 Mir1897-201ENSMUST00000122581 272 ntBASIC17.74■□□□□ 0.43
Lrch1P62046 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC17.74■□□□□ 0.43
Lrch1P62046 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrch1P62046 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lrch1P62046 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lrch1P62046 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Lrch1P62046 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC17.74■□□□□ 0.43
Lrch1P62046 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
Lrch1P62046 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Lrch1P62046 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Lrch1P62046 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.74■□□□□ 0.43
Lrch1P62046 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrch1P62046 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
Lrch1P62046 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lrch1P62046 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrch1P62046 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrch1P62046 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrch1P62046 Gm13216-201ENSMUST00000117145 591 ntBASIC17.73■□□□□ 0.43
Lrch1P62046 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC17.73■□□□□ 0.43
Lrch1P62046 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrch1P62046 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC17.73■□□□□ 0.43
Lrch1P62046 Gm6266-201ENSMUST00000203844 806 ntBASIC17.73■□□□□ 0.43
Lrch1P62046 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrch1P62046 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrch1P62046 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrch1P62046 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrch1P62046 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrch1P62046 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrch1P62046 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Lrch1P62046 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrch1P62046 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC17.72■□□□□ 0.43
Lrch1P62046 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Lrch1P62046 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrch1P62046 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.72■□□□□ 0.43
Lrch1P62046 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrch1P62046 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Lrch1P62046 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrch1P62046 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrch1P62046 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.72■□□□□ 0.43
Lrch1P62046 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lrch1P62046 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrch1P62046 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrch1P62046 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC17.72■□□□□ 0.43
Lrch1P62046 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC17.72■□□□□ 0.43
Lrch1P62046 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC17.72■□□□□ 0.43
Lrch1P62046 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lrch1P62046 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Lrch1P62046 Gm43630-201ENSMUST00000201550 776 ntBASIC17.72■□□□□ 0.43
Lrch1P62046 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrch1P62046 Gm46209-201ENSMUST00000217912 553 ntBASIC17.72■□□□□ 0.43
Lrch1P62046 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrch1P62046 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrch1P62046 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrch1P62046 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrch1P62046 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrch1P62046 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms